Analysis of interatomic Contacts of Structural Units in PDB entry:
5F0S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5F0S entry

There are 6 chains in PDB entry 5F0S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 270ASN 456
B
 ILE 271LEU 455
C
 G 2 C 6
D
 G 1 A 12
E
 G 2 C 6
F
 G 1 A 10
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 5F0S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
272 274Right-handed 310
Helix 2
AA2
A
275 283Right-handed alpha
Helix 3
AA3
A
285 299Right-handed alpha
Helix 4
AA4
A
302 317Right-handed alpha
Helix 5
AA5
A
319 333Right-handed alpha
Helix 6
AA6
A
337 344Right-handed alpha
Helix 7
AA7
A
344 353Right-handed alpha
Helix 8
AA8
A
366 373Right-handed alpha
Helix 9
AA9
A
384 389Right-handed alpha
Helix 10
AB1
A
390 401Right-handed alpha
Helix 11
AB2
A
404 417Right-handed alpha
Helix 12
AB3
A
419 432Right-handed alpha
Helix 13
AB4
A
443 456Right-handed alpha
Helix 14
AB5
B
272 274Right-handed 310
Helix 15
AB6
B
275 283Right-handed alpha
Helix 16
AB7
B
285 299Right-handed alpha
Helix 17
AB8
B
302 316Right-handed alpha
Helix 18
AB9
B
319 333Right-handed alpha
Helix 19
AC1
B
337 344Right-handed alpha
Helix 20
AC2
B
344 353Right-handed alpha
Helix 21
AC3
B
366 373Right-handed alpha
Helix 22
AC4
B
384 389Right-handed alpha
Helix 23
AC5
B
390 401Right-handed alpha
Helix 24
AC6
B
404 417Right-handed alpha
Helix 25
AC7
B
419 432Right-handed alpha
Helix 26
AC8
B
443 455Right-handed alpha
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There are no sheets in PDB entry 5F0S
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il