Analysis of interatomic Contacts of Structural Units in PDB entry:
5F1I

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5F1I entry

There are 10 chains in PDB entry 5F1I (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 1	PRO 270
B	ILE 1	MET 99
C	LYS 1	LYS 9
D	GLY 1	VAL 271
E	ILE 1	MET 99
F	LYS 1	LYS 9
G	GLY 1	VAL 271
H	ILE 1	MET 99
I	LYS 1	LYS 9
J	GLY 1	GLY 91

There are 62 helices in PDB entry 5F1I. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	49	53	Right-handed 310
Helix 2	AA2	A	56	85	Right-handed alpha
Helix 3	AA3	A	137	149	Right-handed alpha
Helix 4	AA4	A	151	156	Right-handed alpha
Helix 5	AA5	A	156	163	Right-handed alpha
Helix 6	AA6	A	163	176	Right-handed alpha
Helix 7	AA7	A	176	181	Right-handed alpha
Helix 8	AA8	D	49	53	Right-handed 310
Helix 9	AA9	D	56	85	Right-handed alpha
Helix 10	AB1	D	137	150	Right-handed alpha
Helix 11	AB2	D	151	156	Right-handed alpha
Helix 12	AB3	D	156	163	Right-handed alpha
Helix 13	AB4	D	163	176	Right-handed alpha
Helix 14	AB5	D	176	181	Right-handed alpha
Helix 15	AB6	D	226	229	Right-handed 310
Helix 16	AB7	G	58	85	Right-handed alpha
Helix 17	AB8	G	137	149	Right-handed alpha
Helix 18	AB9	G	156	163	Right-handed alpha
Helix 19	AC1	G	163	176	Right-handed alpha
Helix 20	AC2	G	176	181	Right-handed alpha
Helix 21	AC3	G	226	229	Right-handed 310
Helix 22	AC4	G	264	268	Right-handed 310
Helix 23	AC5	J	49	54	Right-handed alpha
Helix 24	AC6	J	56	86	Right-handed alpha
Helix 25	AC7	J	137	149	Right-handed alpha
Helix 26	AC8	J	151	156	Right-handed alpha
Helix 27	AC9	J	156	163	Right-handed alpha
Helix 28	AD1	J	163	176	Right-handed alpha
Helix 29	AD2	J	176	181	Right-handed alpha
Helix 30	AD3	J	226	229	Right-handed 310
Helix 31	AD4	M	49	54	Right-handed alpha
Helix 32	AD5	M	56	85	Right-handed alpha
Helix 33	AD6	M	137	150	Right-handed alpha
Helix 34	AD7	M	151	156	Right-handed alpha
Helix 35	AD8	M	156	163	Right-handed alpha
Helix 36	AD9	M	163	176	Right-handed alpha
Helix 37	AE1	M	176	181	Right-handed alpha
Helix 38	AE2	P	49	55	Right-handed 310
Helix 39	AE3	P	56	85	Right-handed alpha
Helix 40	AE4	P	137	149	Right-handed alpha
Helix 41	AE5	P	151	156	Right-handed alpha
Helix 42	AE6	P	156	163	Right-handed alpha
Helix 43	AE7	P	163	176	Right-handed alpha
Helix 44	AE8	P	176	181	Right-handed alpha
Helix 45	AE9	P	254	256	Right-handed 310
Helix 46	AF1	S	49	53	Right-handed 310
Helix 47	AF2	S	56	85	Right-handed alpha
Helix 48	AF3	S	137	149	Right-handed alpha
Helix 49	AF4	S	151	156	Right-handed alpha
Helix 50	AF5	S	156	163	Right-handed alpha
Helix 51	AF6	S	163	176	Right-handed alpha
Helix 52	AF7	S	176	181	Right-handed alpha
Helix 53	AF8	V	49	53	Right-handed 310
Helix 54	AF9	V	56	85	Right-handed alpha
Helix 55	AG1	V	137	151	Right-handed alpha
Helix 56	AG2	V	151	156	Right-handed alpha
Helix 57	AG3	V	156	163	Right-handed alpha
Helix 58	AG4	V	163	176	Right-handed alpha
Helix 59	AG5	V	176	181	Right-handed alpha
Helix 60	AG6	V	226	229	Right-handed 310
Helix 61	AG7	V	254	256	Right-handed 310
Helix 62	AG8	V	266	268	Right-handed 310

There are 54 sheets in PDB entry 5F1I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	47	first strand
Strand 2	A	31	37	anti-parallel
Strand 3	A	21	28	anti-parallel
Strand 4	A	4	12	anti-parallel
Strand 5	A	94	104	anti-parallel
Strand 6	A	108	118	anti-parallel
Strand 7	A	121	126	anti-parallel
Strand 8	A	133	135	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	187	194	first strand
Strand 2	A	199	209	anti-parallel
Strand 3	A	242	251	anti-parallel
Strand 4	A	230	231	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	187	194	first strand
Strand 2	A	199	209	anti-parallel
Strand 3	A	242	251	anti-parallel
Strand 4	A	235	236	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	223	224	first strand
Strand 2	A	215	220	anti-parallel
Strand 3	A	258	263	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	6	11	first strand
Strand 2	B	21	30	anti-parallel
Strand 3	B	62	70	anti-parallel
Strand 4	B	50	51	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	6	11	first strand
Strand 2	B	21	30	anti-parallel
Strand 3	B	62	70	anti-parallel
Strand 4	B	55	56	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	44	45	first strand
Strand 2	B	35	41	anti-parallel
Strand 3	B	78	84	anti-parallel
Strand 4	B	91	94	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	46	47	first strand
Strand 2	D	31	37	anti-parallel
Strand 3	D	21	28	anti-parallel
Strand 4	D	4	12	anti-parallel
Strand 5	D	94	103	anti-parallel
Strand 6	D	109	118	anti-parallel
Strand 7	D	121	126	anti-parallel
Strand 8	D	133	135	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	187	194	first strand
Strand 2	D	199	209	anti-parallel
Strand 3	D	242	251	anti-parallel
Strand 4	D	230	231	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	187	194	first strand
Strand 2	D	199	209	anti-parallel
Strand 3	D	242	251	anti-parallel
Strand 4	D	235	236	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	223	224	first strand
Strand 2	D	215	220	anti-parallel
Strand 3	D	258	263	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	6	11	first strand
Strand 2	E	21	30	anti-parallel
Strand 3	E	62	70	anti-parallel
Strand 4	E	50	51	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	44	45	first strand
Strand 2	E	36	41	anti-parallel
Strand 3	E	78	83	anti-parallel
Strand 4	E	91	94	anti-parallel

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There are 8 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	46	47	first strand
Strand 2	G	31	37	anti-parallel
Strand 3	G	21	28	anti-parallel
Strand 4	G	4	12	anti-parallel
Strand 5	G	94	104	anti-parallel
Strand 6	G	108	118	anti-parallel
Strand 7	G	121	126	anti-parallel
Strand 8	G	133	135	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	187	194	first strand
Strand 2	G	199	209	anti-parallel
Strand 3	G	242	251	anti-parallel
Strand 4	G	230	231	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	187	194	first strand
Strand 2	G	199	209	anti-parallel
Strand 3	G	242	251	anti-parallel
Strand 4	G	235	236	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	223	224	first strand
Strand 2	G	215	220	anti-parallel
Strand 3	G	258	263	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	6	11	first strand
Strand 2	H	21	30	anti-parallel
Strand 3	H	62	70	anti-parallel
Strand 4	H	50	51	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	6	11	first strand
Strand 2	H	21	30	anti-parallel
Strand 3	H	62	70	anti-parallel
Strand 4	H	55	56	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	44	45	first strand
Strand 2	H	36	41	anti-parallel
Strand 3	H	78	83	anti-parallel
Strand 4	H	91	94	anti-parallel

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There are 8 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	46	47	first strand
Strand 2	J	31	37	anti-parallel
Strand 3	J	21	28	anti-parallel
Strand 4	J	4	12	anti-parallel
Strand 5	J	94	103	anti-parallel
Strand 6	J	109	118	anti-parallel
Strand 7	J	121	126	anti-parallel
Strand 8	J	133	135	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	187	194	first strand
Strand 2	J	199	209	anti-parallel
Strand 3	J	242	251	anti-parallel
Strand 4	J	230	231	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	187	194	first strand
Strand 2	J	199	209	anti-parallel
Strand 3	J	242	251	anti-parallel
Strand 4	J	235	236	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	223	224	first strand
Strand 2	J	215	220	anti-parallel
Strand 3	J	258	263	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	6	11	first strand
Strand 2	K	21	30	anti-parallel
Strand 3	K	62	70	anti-parallel
Strand 4	K	50	51	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	6	11	first strand
Strand 2	K	21	30	anti-parallel
Strand 3	K	62	70	anti-parallel
Strand 4	K	55	56	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	44	45	first strand
Strand 2	K	35	41	anti-parallel
Strand 3	K	79	84	anti-parallel
Strand 4	K	91	94	anti-parallel

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There are 8 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	46	47	first strand
Strand 2	M	31	37	anti-parallel
Strand 3	M	21	28	anti-parallel
Strand 4	M	4	12	anti-parallel
Strand 5	M	94	104	anti-parallel
Strand 6	M	108	118	anti-parallel
Strand 7	M	121	126	anti-parallel
Strand 8	M	133	135	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	187	194	first strand
Strand 2	M	200	209	anti-parallel
Strand 3	M	242	249	anti-parallel
Strand 4	M	230	231	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	187	194	first strand
Strand 2	M	200	209	anti-parallel
Strand 3	M	242	249	anti-parallel
Strand 4	M	235	236	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	215	219	first strand
Strand 2	M	259	263	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	6	11	first strand
Strand 2	N	21	30	anti-parallel
Strand 3	N	62	70	anti-parallel
Strand 4	N	50	51	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	6	11	first strand
Strand 2	N	21	30	anti-parallel
Strand 3	N	62	70	anti-parallel
Strand 4	N	55	56	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	44	45	first strand
Strand 2	N	35	41	anti-parallel
Strand 3	N	78	84	anti-parallel
Strand 4	N	91	94	anti-parallel

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There are 8 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	46	47	first strand
Strand 2	P	31	37	anti-parallel
Strand 3	P	21	28	anti-parallel
Strand 4	P	3	12	anti-parallel
Strand 5	P	94	104	anti-parallel
Strand 6	P	108	118	anti-parallel
Strand 7	P	121	126	anti-parallel
Strand 8	P	133	135	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	187	194	first strand
Strand 2	P	200	209	anti-parallel
Strand 3	P	242	250	anti-parallel
Strand 4	P	230	231	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	187	194	first strand
Strand 2	P	200	209	anti-parallel
Strand 3	P	242	250	anti-parallel
Strand 4	P	235	236	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	223	224	first strand
Strand 2	P	215	220	anti-parallel
Strand 3	P	258	263	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	6	11	first strand
Strand 2	Q	21	30	anti-parallel
Strand 3	Q	62	70	anti-parallel
Strand 4	Q	50	51	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	6	11	first strand
Strand 2	Q	21	30	anti-parallel
Strand 3	Q	62	70	anti-parallel
Strand 4	Q	55	56	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	44	45	first strand
Strand 2	Q	36	41	anti-parallel
Strand 3	Q	78	83	anti-parallel
Strand 4	Q	91	94	anti-parallel

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There are 8 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	46	47	first strand
Strand 2	S	31	37	anti-parallel
Strand 3	S	21	28	anti-parallel
Strand 4	S	4	12	anti-parallel
Strand 5	S	94	104	anti-parallel
Strand 6	S	108	118	anti-parallel
Strand 7	S	121	126	anti-parallel
Strand 8	S	133	135	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	187	194	first strand
Strand 2	S	199	209	anti-parallel
Strand 3	S	242	251	anti-parallel
Strand 4	S	230	231	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	187	194	first strand
Strand 2	S	199	209	anti-parallel
Strand 3	S	242	251	anti-parallel
Strand 4	S	235	236	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	223	224	first strand
Strand 2	S	215	220	anti-parallel
Strand 3	S	258	263	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	6	11	first strand
Strand 2	T	21	30	anti-parallel
Strand 3	T	62	70	anti-parallel
Strand 4	T	50	51	anti-parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	6	11	first strand
Strand 2	T	21	30	anti-parallel
Strand 3	T	62	70	anti-parallel
Strand 4	T	55	56	anti-parallel

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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	44	45	first strand
Strand 2	T	36	41	anti-parallel
Strand 3	T	78	83	anti-parallel
Strand 4	T	91	94	anti-parallel

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There are 8 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	46	47	first strand
Strand 2	V	31	37	anti-parallel
Strand 3	V	21	28	anti-parallel
Strand 4	V	4	12	anti-parallel
Strand 5	V	94	103	anti-parallel
Strand 6	V	109	118	anti-parallel
Strand 7	V	121	126	anti-parallel
Strand 8	V	133	135	anti-parallel

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There are 4 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	187	194	first strand
Strand 2	V	200	209	anti-parallel
Strand 3	V	242	250	anti-parallel
Strand 4	V	230	231	anti-parallel

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There are 4 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	187	194	first strand
Strand 2	V	200	209	anti-parallel
Strand 3	V	242	250	anti-parallel
Strand 4	V	235	236	anti-parallel

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There are 3 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	223	224	first strand
Strand 2	V	214	220	anti-parallel
Strand 3	V	258	264	anti-parallel

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There are 4 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	6	11	first strand
Strand 2	W	21	30	anti-parallel
Strand 3	W	62	70	anti-parallel
Strand 4	W	50	51	anti-parallel

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There are 4 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	44	45	first strand
Strand 2	W	35	41	anti-parallel
Strand 3	W	78	84	anti-parallel
Strand 4	W	91	94	anti-parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 5F1I

Analysis of interatomic Contacts of Structural Units in PDB entry:
5F1I