Analysis of interatomic Contacts of Structural Units in PDB entry:
5F73


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5F73 entry

There are 5 chains in PDB entry 5F73 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 4LEU 291
B
 SER 2LEU 291
C
 LYS 3LEU 291
D
 LYS 3LEU 291
E
 SER 2ILE 195
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 5F73. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
62 66Right-handed 310
Helix 2
AA2
A
67 78Right-handed alpha
Helix 3
AA3
A
139 153Right-handed alpha
Helix 4
AA4
A
164 168Right-handed 310
Helix 5
AA5
A
189 199Right-handed alpha
Helix 6
AA6
A
210 218Right-handed alpha
Helix 7
AA7
A
232 236Right-handed 310
Helix 8
AA8
A
238 270Right-handed alpha
Helix 9
AA9
A
273 287Right-handed alpha
Helix 10
AB1
B
62 66Right-handed 310
Helix 11
AB2
B
67 78Right-handed alpha
Helix 12
AB3
B
139 153Right-handed alpha
Helix 13
AB4
B
164 168Right-handed 310
Helix 14
AB5
B
189 199Right-handed alpha
Helix 15
AB6
B
210 218Right-handed alpha
Helix 16
AB7
B
241 270Right-handed alpha
Helix 17
AB8
B
273 287Right-handed alpha
Helix 18
AB9
C
62 66Right-handed 310
Helix 19
AC1
C
67 78Right-handed alpha
Helix 20
AC2
C
139 153Right-handed alpha
Helix 21
AC3
C
164 168Right-handed 310
Helix 22
AC4
C
189 199Right-handed alpha
Helix 23
AC5
C
210 218Right-handed alpha
Helix 24
AC6
C
243 270Right-handed alpha
Helix 25
AC7
C
273 287Right-handed alpha
Helix 26
AC8
D
62 66Right-handed 310
Helix 27
AC9
D
67 78Right-handed alpha
Helix 28
AD1
D
139 153Right-handed alpha
Helix 29
AD2
D
164 168Right-handed 310
Helix 30
AD3
D
189 199Right-handed alpha
Helix 31
AD4
D
210 218Right-handed alpha
Helix 32
AD5
D
238 270Right-handed alpha
Helix 33
AD6
D
273 287Right-handed alpha
Helix 34
AD7
E
62 66Right-handed 310
Helix 35
AD8
E
67 78Right-handed alpha
Helix 36
AD9
E
139 153Right-handed alpha
Helix 37
AE1
E
164 168Right-handed 310
Helix 38
AE2
E
189 199Right-handed alpha
Helix 39
AE3
E
207 218Right-handed alpha
Helix 40
AE4
E
232 236Right-handed 310
Helix 41
AE5
E
242 270Right-handed alpha
Helix 42
AE6
E
273 287Right-handed alpha
Helix 43
AE7
F
62 66Right-handed 310
Helix 44
AE8
F
67 78Right-handed alpha
Helix 45
AE9
F
139 153Right-handed alpha
Helix 46
AF1
F
164 168Right-handed 310
Helix 47
AF2
F
189 199Right-handed alpha
Helix 48
AF3
F
210 218Right-handed alpha
Helix 49
AF4
F
243 270Right-handed alpha
Helix 50
AF5
F
273 287Right-handed alpha
Helix 51
AF6
F
288 292Right-handed 310
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There are 18 sheets in PDB entry 5F73. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 26first strand
Strand 2
A
39 44anti-parallel
Strand 3
A
47 53anti-parallel
Strand 4
A
5 10parallel
Strand 5
A
82 91parallel
Strand 6
A
203 205anti-parallel
Strand 7
A
178 182parallel
Strand 8
A
106 110parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 26first strand
Strand 2
A
39 44anti-parallel
Strand 3
A
47 53anti-parallel
Strand 4
A
5 10parallel
Strand 5
A
82 91parallel
Strand 6
A
221 229parallel
Strand 7
A
101 103anti-parallel
Strand 8
A
172 174parallel
Strand 9
A
156 158parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 120first strand
Strand 2
A
126 127parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 26first strand
Strand 2
B
39 44anti-parallel
Strand 3
B
47 53anti-parallel
Strand 4
B
5 10parallel
Strand 5
B
82 91parallel
Strand 6
B
203 205anti-parallel
Strand 7
B
178 182parallel
Strand 8
B
106 110parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 26first strand
Strand 2
B
39 44anti-parallel
Strand 3
B
47 53anti-parallel
Strand 4
B
5 10parallel
Strand 5
B
82 91parallel
Strand 6
B
221 229parallel
Strand 7
B
101 103anti-parallel
Strand 8
B
172 174parallel
Strand 9
B
156 158parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 120first strand
Strand 2
B
126 127parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
24 26first strand
Strand 2
C
39 44anti-parallel
Strand 3
C
47 53anti-parallel
Strand 4
C
6 10parallel
Strand 5
C
82 91parallel
Strand 6
C
203 205anti-parallel
Strand 7
C
178 182parallel
Strand 8
C
106 110parallel
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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
24 26first strand
Strand 2
C
39 44anti-parallel
Strand 3
C
47 53anti-parallel
Strand 4
C
6 10parallel
Strand 5
C
82 91parallel
Strand 6
C
221 229parallel
Strand 7
C
101 103anti-parallel
Strand 8
C
172 174parallel
Strand 9
C
156 158parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
119 120first strand
Strand 2
C
126 127parallel
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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
25 26first strand
Strand 2
D
39 44anti-parallel
Strand 3
D
47 53anti-parallel
Strand 4
D
5 10parallel
Strand 5
D
82 91parallel
Strand 6
D
203 205anti-parallel
Strand 7
D
178 182parallel
Strand 8
D
106 110parallel
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There are 9 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
25 26first strand
Strand 2
D
39 44anti-parallel
Strand 3
D
47 53anti-parallel
Strand 4
D
5 10parallel
Strand 5
D
82 91parallel
Strand 6
D
221 228parallel
Strand 7
D
101 103anti-parallel
Strand 8
D
172 174parallel
Strand 9
D
156 158parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
119 120first strand
Strand 2
D
126 127parallel
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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
24 26first strand
Strand 2
E
39 44anti-parallel
Strand 3
E
47 53anti-parallel
Strand 4
E
5 10parallel
Strand 5
E
82 91parallel
Strand 6
E
203 205anti-parallel
Strand 7
E
178 182parallel
Strand 8
E
106 110parallel
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There are 9 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
24 26first strand
Strand 2
E
39 44anti-parallel
Strand 3
E
47 53anti-parallel
Strand 4
E
5 10parallel
Strand 5
E
82 91parallel
Strand 6
E
221 228parallel
Strand 7
E
101 103anti-parallel
Strand 8
E
172 174parallel
Strand 9
E
156 158parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
119 120first strand
Strand 2
E
126 127parallel
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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
40 44first strand
Strand 2
F
47 53anti-parallel
Strand 3
F
5 10parallel
Strand 4
F
82 91parallel
Strand 5
F
203 205anti-parallel
Strand 6
F
178 182parallel
Strand 7
F
106 110parallel
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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
40 44first strand
Strand 2
F
47 53anti-parallel
Strand 3
F
5 10parallel
Strand 4
F
82 91parallel
Strand 5
F
221 229parallel
Strand 6
F
101 103anti-parallel
Strand 7
F
172 174parallel
Strand 8
F
156 158parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
119 120first strand
Strand 2
F
126 127parallel
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