Analysis of interatomic Contacts of Structural Units in PDB entry:
5F7T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5F7T entry

There are 4 chains in PDB entry 5F7T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 ASP 95LEU 228
F
 ASP 95MET 226
H
 ASP 95THR 227
L
 ASP 95THR 227
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5F7T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
E
116 121Right-handed alpha
Helix 2
AA2
E
122 126Right-handed 310
Helix 3
AA3
E
133 169Right-handed alpha
Helix 4
AA4
E
170 172Right-handed 310
Helix 5
AA5
E
173 207Right-handed alpha
Helix 6
AA6
E
208 214Right-handed alpha
Helix 7
AA7
E
215 228Right-handed alpha
Helix 8
AA8
F
116 121Right-handed alpha
Helix 9
AA9
F
122 126Right-handed 310
Helix 10
AB1
F
133 169Right-handed alpha
Helix 11
AB2
F
170 172Right-handed 310
Helix 12
AB3
F
173 207Right-handed alpha
Helix 13
AB4
F
208 214Right-handed alpha
Helix 14
AB5
F
215 226Right-handed alpha
Helix 15
AB6
H
116 121Right-handed alpha
Helix 16
AB7
H
122 126Right-handed 310
Helix 17
AB8
H
133 169Right-handed alpha
Helix 18
AB9
H
170 172Right-handed 310
Helix 19
AC1
H
173 207Right-handed alpha
Helix 20
AC2
H
208 214Right-handed alpha
Helix 21
AC3
H
215 227Right-handed alpha
Helix 22
AC4
L
116 121Right-handed alpha
Helix 23
AC5
L
122 126Right-handed 310
Helix 24
AC6
L
133 169Right-handed alpha
Helix 25
AC7
L
170 172Right-handed 310
Helix 26
AC8
L
173 207Right-handed alpha
Helix 27
AC9
L
208 214Right-handed alpha
Helix 28
AD1
L
215 227Right-handed alpha
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There are 4 sheets in PDB entry 5F7T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
113 115first strand
Strand 2
E
106 108anti-parallel
Strand 3
E
130 132anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
113 115first strand
Strand 2
F
106 108anti-parallel
Strand 3
F
130 132anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
113 115first strand
Strand 2
H
106 108anti-parallel
Strand 3
H
130 132anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
114 115first strand
Strand 2
L
106 108anti-parallel
Strand 3
L
130 132anti-parallel
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