Analysis of interatomic Contacts of Structural Units in PDB entry:
5F9H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5F9H entry

There are 12 chains in PDB entry 5F9H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 241	GLU 922
B	A 2	C 24
C	PHE 241	GLU 922
D	A 2	C 24
E	LYS 242	GLU 922
F	A 2	C 24
G	PRO 240	GLU 922
H	A 2	C 24
I	PRO 240	MET 923
J	A 2	C 24
K	LYS 242	GLU 922
L	A 2	C 24

There are152 helices in PDB entry 5F9H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	244	256	Right-handed alpha
Helix 2	AA2	A	269	284	Right-handed alpha
Helix 3	AA3	A	299	315	Right-handed alpha
Helix 4	AA4	A	333	340	Right-handed alpha
Helix 5	AA5	A	347	358	Right-handed alpha
Helix 6	AA6	A	362	366	Right-handed 310
Helix 7	AA7	A	374	377	Right-handed 310
Helix 8	AA8	A	381	396	Right-handed alpha
Helix 9	AA9	A	419	434	Right-handed alpha
Helix 10	AB1	A	445	451	Right-handed alpha
Helix 11	AB2	A	470	487	Right-handed alpha
Helix 12	AB3	A	506	523	Right-handed alpha
Helix 13	AB4	A	530	558	Right-handed alpha
Helix 14	AB5	A	559	575	Right-handed alpha
Helix 15	AB6	A	582	602	Right-handed alpha
Helix 16	AB7	A	603	607	Right-handed 310
Helix 17	AB8	A	608	625	Right-handed alpha
Helix 18	AB9	A	636	649	Right-handed alpha
Helix 19	AC1	A	720	728	Right-handed alpha
Helix 20	AC2	A	729	732	Right-handed 310
Helix 21	AC3	A	744	769	Right-handed alpha
Helix 22	AC4	A	772	794	Right-handed alpha
Helix 23	AC5	A	907	911	Right-handed 310
Helix 24	AC6	C	244	256	Right-handed alpha
Helix 25	AC7	C	269	284	Right-handed alpha
Helix 26	AC8	C	299	315	Right-handed alpha
Helix 27	AC9	C	333	340	Right-handed alpha
Helix 28	AD1	C	347	358	Right-handed alpha
Helix 29	AD2	C	362	366	Right-handed 310
Helix 30	AD3	C	374	377	Right-handed 310
Helix 31	AD4	C	381	396	Right-handed alpha
Helix 32	AD5	C	419	434	Right-handed alpha
Helix 33	AD6	C	445	450	Right-handed alpha
Helix 34	AD7	C	470	490	Right-handed alpha
Helix 35	AD8	C	506	521	Right-handed alpha
Helix 36	AD9	C	527	558	Right-handed alpha
Helix 37	AE1	C	559	578	Right-handed alpha
Helix 38	AE2	C	580	593	Right-handed alpha
Helix 39	AE3	C	593	602	Right-handed alpha
Helix 40	AE4	C	603	607	Right-handed 310
Helix 41	AE5	C	608	625	Right-handed alpha
Helix 42	AE6	C	636	649	Right-handed alpha
Helix 43	AE7	C	650	654	Right-handed 310
Helix 44	AE8	C	720	728	Right-handed alpha
Helix 45	AE9	C	729	732	Right-handed 310
Helix 46	AF1	C	745	769	Right-handed alpha
Helix 47	AF2	C	772	792	Right-handed alpha
Helix 48	AF3	C	837	840	Right-handed 310
Helix 49	AF4	C	866	869	Right-handed 310
Helix 50	AF5	E	244	256	Right-handed alpha
Helix 51	AF6	E	269	284	Right-handed alpha
Helix 52	AF7	E	299	315	Right-handed alpha
Helix 53	AF8	E	333	340	Right-handed alpha
Helix 54	AF9	E	347	358	Right-handed alpha
Helix 55	AG1	E	362	366	Right-handed 310
Helix 56	AG2	E	374	377	Right-handed 310
Helix 57	AG3	E	381	396	Right-handed alpha
Helix 58	AG4	E	419	434	Right-handed alpha
Helix 59	AG5	E	445	450	Right-handed alpha
Helix 60	AG6	E	470	490	Right-handed alpha
Helix 61	AG7	E	506	523	Right-handed alpha
Helix 62	AG8	E	528	558	Right-handed alpha
Helix 63	AG9	E	559	573	Right-handed alpha
Helix 64	AH1	E	581	602	Right-handed alpha
Helix 65	AH2	E	603	607	Right-handed 310
Helix 66	AH3	E	608	625	Right-handed alpha
Helix 67	AH4	E	636	649	Right-handed alpha
Helix 68	AH5	E	650	654	Right-handed 310
Helix 69	AH6	E	720	728	Right-handed alpha
Helix 70	AH7	E	729	732	Right-handed 310
Helix 71	AH8	E	745	769	Right-handed alpha
Helix 72	AH9	E	772	794	Right-handed alpha
Helix 73	AI1	E	835	841	Right-handed alpha
Helix 74	AI2	E	907	911	Right-handed 310
Helix 75	AI3	G	244	256	Right-handed alpha
Helix 76	AI4	G	269	285	Right-handed alpha
Helix 77	AI5	G	299	315	Right-handed alpha
Helix 78	AI6	G	333	340	Right-handed alpha
Helix 79	AI7	G	347	358	Right-handed alpha
Helix 80	AI8	G	362	366	Right-handed 310
Helix 81	AI9	G	374	377	Right-handed 310
Helix 82	AJ1	G	381	396	Right-handed alpha
Helix 83	AJ2	G	419	435	Right-handed alpha
Helix 84	AJ3	G	445	453	Right-handed alpha
Helix 85	AJ4	G	469	488	Right-handed alpha
Helix 86	AJ5	G	506	520	Right-handed alpha
Helix 87	AJ6	G	527	558	Right-handed alpha
Helix 88	AJ7	G	559	577	Right-handed alpha
Helix 89	AJ8	G	580	602	Right-handed alpha
Helix 90	AJ9	G	603	607	Right-handed 310
Helix 91	AK1	G	608	625	Right-handed alpha
Helix 92	AK2	G	636	649	Right-handed alpha
Helix 93	AK3	G	650	654	Right-handed 310
Helix 94	AK4	G	720	728	Right-handed alpha
Helix 95	AK5	G	729	732	Right-handed 310
Helix 96	AK6	G	744	769	Right-handed alpha
Helix 97	AK7	G	772	793	Right-handed alpha
Helix 98	AK8	G	837	840	Right-handed 310
Helix 99	AK9	G	866	869	Right-handed 310
Helix 100	AL1	G	907	911	Right-handed 310
Helix 101	AL2	I	244	256	Right-handed alpha
Helix 102	AL3	I	269	284	Right-handed alpha
Helix 103	AL4	I	299	315	Right-handed alpha
Helix 104	AL5	I	333	340	Right-handed alpha
Helix 105	AL6	I	347	357	Right-handed alpha
Helix 106	AL7	I	362	366	Right-handed 310
Helix 107	AL8	I	374	377	Right-handed 310
Helix 108	AL9	I	381	395	Right-handed alpha
Helix 109	AM1	I	419	434	Right-handed alpha
Helix 110	AM2	I	445	451	Right-handed alpha
Helix 111	AM3	I	470	490	Right-handed alpha
Helix 112	AM4	I	507	520	Right-handed alpha
Helix 113	AM5	I	521	523	Right-handed 310
Helix 114	AM6	I	528	558	Right-handed alpha
Helix 115	AM7	I	559	577	Right-handed alpha
Helix 116	AM8	I	580	593	Right-handed alpha
Helix 117	AM9	I	593	603	Right-handed alpha
Helix 118	AN1	I	608	625	Right-handed alpha
Helix 119	AN2	I	636	649	Right-handed alpha
Helix 120	AN3	I	650	654	Right-handed 310
Helix 121	AN4	I	720	728	Right-handed alpha
Helix 122	AN5	I	729	732	Right-handed 310
Helix 123	AN6	I	744	769	Right-handed alpha
Helix 124	AN7	I	772	794	Right-handed alpha
Helix 125	AN8	I	837	840	Right-handed 310
Helix 126	AN9	I	866	869	Right-handed 310
Helix 127	AO1	I	907	911	Right-handed 310
Helix 128	AO2	K	244	256	Right-handed alpha
Helix 129	AO3	K	269	284	Right-handed alpha
Helix 130	AO4	K	299	315	Right-handed alpha
Helix 131	AO5	K	333	340	Right-handed alpha
Helix 132	AO6	K	347	358	Right-handed alpha
Helix 133	AO7	K	362	366	Right-handed 310
Helix 134	AO8	K	374	377	Right-handed 310
Helix 135	AO9	K	381	396	Right-handed alpha
Helix 136	AP1	K	419	434	Right-handed alpha
Helix 137	AP2	K	445	450	Right-handed alpha
Helix 138	AP3	K	470	488	Right-handed alpha
Helix 139	AP4	K	506	523	Right-handed alpha
Helix 140	AP5	K	527	558	Right-handed alpha
Helix 141	AP6	K	559	577	Right-handed alpha
Helix 142	AP7	K	582	593	Right-handed alpha
Helix 143	AP8	K	593	603	Right-handed alpha
Helix 144	AP9	K	608	625	Right-handed alpha
Helix 145	AQ1	K	636	649	Right-handed alpha
Helix 146	AQ2	K	650	654	Right-handed 310
Helix 147	AQ3	K	720	728	Right-handed alpha
Helix 148	AQ4	K	729	732	Right-handed 310
Helix 149	AQ5	K	744	770	Right-handed alpha
Helix 150	AQ6	K	772	793	Right-handed alpha
Helix 151	AQ7	K	835	840	Right-handed alpha
Helix 152	AQ8	K	907	911	Right-handed 310

There are 34 sheets in PDB entry 5F9H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	321	324	first strand
Strand 2	A	343	346	parallel
Strand 3	A	293	296	parallel
Strand 4	A	368	372	parallel
Strand 5	A	404	409	parallel
Strand 6	A	260	263	parallel
Strand 7	A	438	440	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	457	462	first strand
Strand 2	A	737	742	parallel
Strand 3	A	711	715	parallel
Strand 4	A	630	633	parallel
Strand 5	A	693	696	parallel
Strand 6	A	658	661	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	816	819	first strand
Strand 2	A	806	810	anti-parallel
Strand 3	A	892	896	anti-parallel
Strand 4	A	902	903	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	830	833	first strand
Strand 2	A	823	826	anti-parallel
Strand 3	A	916	917	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	842	846	first strand
Strand 2	A	856	864	anti-parallel
Strand 3	A	852	853	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	842	846	first strand
Strand 2	A	856	864	anti-parallel
Strand 3	A	872	879	anti-parallel
Strand 4	A	882	887	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	321	324	first strand
Strand 2	C	343	346	parallel
Strand 3	C	293	296	parallel
Strand 4	C	368	372	parallel
Strand 5	C	404	409	parallel
Strand 6	C	260	263	parallel
Strand 7	C	438	440	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	457	462	first strand
Strand 2	C	737	742	parallel
Strand 3	C	711	715	parallel
Strand 4	C	630	633	parallel
Strand 5	C	693	696	parallel
Strand 6	C	658	661	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	816	819	first strand
Strand 2	C	806	810	anti-parallel
Strand 3	C	892	896	anti-parallel
Strand 4	C	902	903	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	830	833	first strand
Strand 2	C	823	826	anti-parallel
Strand 3	C	916	917	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	842	846	first strand
Strand 2	C	856	864	anti-parallel
Strand 3	C	852	853	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	842	846	first strand
Strand 2	C	856	864	anti-parallel
Strand 3	C	872	879	anti-parallel
Strand 4	C	882	887	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	321	324	first strand
Strand 2	E	343	346	parallel
Strand 3	E	293	296	parallel
Strand 4	E	368	372	parallel
Strand 5	E	404	409	parallel
Strand 6	E	260	263	parallel
Strand 7	E	438	440	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	457	462	first strand
Strand 2	E	737	742	parallel
Strand 3	E	711	715	parallel
Strand 4	E	630	633	parallel
Strand 5	E	693	696	parallel
Strand 6	E	658	661	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	816	819	first strand
Strand 2	E	807	810	anti-parallel
Strand 3	E	892	895	anti-parallel
Strand 4	E	902	904	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	830	833	first strand
Strand 2	E	823	826	anti-parallel
Strand 3	E	916	917	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	842	846	first strand
Strand 2	E	858	864	anti-parallel
Strand 3	E	872	879	anti-parallel
Strand 4	E	882	887	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	321	324	first strand
Strand 2	G	343	346	parallel
Strand 3	G	293	296	parallel
Strand 4	G	368	372	parallel
Strand 5	G	404	409	parallel
Strand 6	G	260	263	parallel
Strand 7	G	438	440	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	457	462	first strand
Strand 2	G	737	742	parallel
Strand 3	G	711	715	parallel
Strand 4	G	630	633	parallel
Strand 5	G	693	696	parallel
Strand 6	G	659	661	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	816	819	first strand
Strand 2	G	807	810	anti-parallel
Strand 3	G	892	896	anti-parallel
Strand 4	G	901	904	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	823	826	first strand
Strand 2	G	830	833	anti-parallel
Strand 3	G	882	887	anti-parallel
Strand 4	G	872	879	anti-parallel
Strand 5	G	856	864	anti-parallel
Strand 6	G	842	846	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	823	826	first strand
Strand 2	G	830	833	anti-parallel
Strand 3	G	882	887	anti-parallel
Strand 4	G	872	879	anti-parallel
Strand 5	G	856	864	anti-parallel
Strand 6	G	852	853	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	321	324	first strand
Strand 2	I	343	346	parallel
Strand 3	I	293	296	parallel
Strand 4	I	368	372	parallel
Strand 5	I	404	409	parallel
Strand 6	I	260	263	parallel
Strand 7	I	438	440	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	457	462	first strand
Strand 2	I	737	742	parallel
Strand 3	I	711	715	parallel
Strand 4	I	630	633	parallel
Strand 5	I	693	696	parallel
Strand 6	I	658	661	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	816	819	first strand
Strand 2	I	806	810	anti-parallel
Strand 3	I	892	896	anti-parallel
Strand 4	I	902	904	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	823	826	first strand
Strand 2	I	830	833	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	842	846	first strand
Strand 2	I	856	864	anti-parallel
Strand 3	I	852	853	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	842	846	first strand
Strand 2	I	856	864	anti-parallel
Strand 3	I	872	879	anti-parallel
Strand 4	I	882	887	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	321	324	first strand
Strand 2	K	343	346	parallel
Strand 3	K	293	296	parallel
Strand 4	K	368	372	parallel
Strand 5	K	404	409	parallel
Strand 6	K	260	263	parallel
Strand 7	K	438	440	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	457	462	first strand
Strand 2	K	737	742	parallel
Strand 3	K	711	715	parallel
Strand 4	K	630	633	parallel
Strand 5	K	693	696	parallel
Strand 6	K	659	661	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	816	819	first strand
Strand 2	K	806	810	anti-parallel
Strand 3	K	892	896	anti-parallel
Strand 4	K	902	904	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	830	833	first strand
Strand 2	K	823	826	anti-parallel
Strand 3	K	916	917	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	842	846	first strand
Strand 2	K	856	864	anti-parallel
Strand 3	K	852	853	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	842	846	first strand
Strand 2	K	856	864	anti-parallel
Strand 3	K	872	879	anti-parallel
Strand 4	K	882	887	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5F9H

Analysis of interatomic Contacts of Structural Units in PDB entry:
5F9H