Analysis of interatomic Contacts of Structural Units in PDB entry:
5F9Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5F9Q entry

There is 1 chain in PDB entry 5F9Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 16ASN 214
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 5F9Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 30Right-handed alpha
Helix 2
AA2
A
42 51Right-handed alpha
Helix 3
AA3
A
83 90Right-handed alpha
Helix 4
AA4
A
101 108Right-handed alpha
Helix 5
AA5
A
115 124Right-handed alpha
Helix 6
AA6
A
164 171Right-handed alpha
Helix 7
AA7
A
185 187Right-handed 310
Helix 8
AA8
A
188 205Right-handed alpha
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There are 2 sheets in PDB entry 5F9Q. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 97first strand
Strand 2
A
138 146anti-parallel
Strand 3
A
111 114parallel
Strand 4
A
159 163anti-parallel
Strand 5
A
73 82parallel
Strand 6
A
55 70anti-parallel
Strand 7
A
178 183anti-parallel
Strand 8
A
17 22anti-parallel
Strand 9
A
210 211anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 97first strand
Strand 2
A
138 146anti-parallel
Strand 3
A
132 135anti-parallel
Strand 4
A
55 70anti-parallel
Strand 5
A
178 183anti-parallel
Strand 6
A
17 22anti-parallel
Strand 7
A
210 211anti-parallel
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