Analysis of interatomic Contacts of Structural Units in PDB entry:
5FA0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FA0 entry

There are 2 chains in PDB entry 5FA0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1HIS 407
B
 GLY 1LEU 402
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 5FA0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 29Right-handed alpha
Helix 2
AA2
A
38 44Right-handed alpha
Helix 3
AA3
A
47 51Right-handed 310
Helix 4
AA4
A
53 56Right-handed 310
Helix 5
AA5
A
57 65Right-handed alpha
Helix 6
AA6
A
70 76Right-handed alpha
Helix 7
AA7
A
85 93Right-handed alpha
Helix 8
AA8
A
97 108Right-handed alpha
Helix 9
AA9
A
110 123Right-handed alpha
Helix 10
AB1
A
124 129Right-handed alpha
Helix 11
AB2
A
140 150Right-handed alpha
Helix 12
AB3
A
183 192Right-handed alpha
Helix 13
AB4
A
193 195Right-handed 310
Helix 14
AB5
A
200 209Right-handed alpha
Helix 15
AB6
A
232 237Right-handed alpha
Helix 16
AB7
A
243 253Right-handed alpha
Helix 17
AB8
A
256 258Right-handed 310
Helix 18
AB9
A
274 277Right-handed 310
Helix 19
AC1
A
284 290Right-handed alpha
Helix 20
AC2
A
301 309Right-handed alpha
Helix 21
AC3
A
321 326Right-handed alpha
Helix 22
AC4
A
329 343Right-handed alpha
Helix 23
AC5
A
349 352Right-handed 310
Helix 24
AC6
A
353 362Right-handed alpha
Helix 25
AC7
A
365 378Right-handed alpha
Helix 26
AC8
A
391 401Right-handed alpha
Helix 27
AC9
B
18 29Right-handed alpha
Helix 28
AD1
B
39 44Right-handed alpha
Helix 29
AD2
B
53 56Right-handed 310
Helix 30
AD3
B
57 65Right-handed alpha
Helix 31
AD4
B
70 76Right-handed alpha
Helix 32
AD5
B
85 93Right-handed alpha
Helix 33
AD6
B
97 108Right-handed alpha
Helix 34
AD7
B
110 123Right-handed alpha
Helix 35
AD8
B
124 130Right-handed alpha
Helix 36
AD9
B
140 150Right-handed alpha
Helix 37
AE1
B
183 191Right-handed alpha
Helix 38
AE2
B
192 195Right-handed 310
Helix 39
AE3
B
200 207Right-handed alpha
Helix 40
AE4
B
232 237Right-handed alpha
Helix 41
AE5
B
243 253Right-handed alpha
Helix 42
AE6
B
256 258Right-handed 310
Helix 43
AE7
B
284 290Right-handed alpha
Helix 44
AE8
B
301 309Right-handed alpha
Helix 45
AE9
B
321 326Right-handed alpha
Helix 46
AF1
B
329 343Right-handed alpha
Helix 47
AF2
B
349 352Right-handed 310
Helix 48
AF3
B
353 362Right-handed alpha
Helix 49
AF4
B
365 378Right-handed alpha
Helix 50
AF5
B
391 400Right-handed alpha
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There are 5 sheets in PDB entry 5FA0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 81first strand
Strand 2
A
33 37parallel
Strand 3
A
2 5parallel
Strand 4
A
133 136parallel
Strand 5
A
153 159parallel
Strand 6
A
170 174anti-parallel
Strand 7
A
346 347anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 279first strand
Strand 2
A
260 263parallel
Strand 3
A
223 226parallel
Strand 4
A
294 297parallel
Strand 5
A
312 315parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 272first strand
Strand 2
B
270 272anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 81first strand
Strand 2
B
33 37parallel
Strand 3
B
2 5parallel
Strand 4
B
133 136parallel
Strand 5
B
154 159parallel
Strand 6
B
170 174anti-parallel
Strand 7
B
346 347anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
278 279first strand
Strand 2
B
260 263parallel
Strand 3
B
223 226parallel
Strand 4
B
294 297parallel
Strand 5
B
312 315parallel
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