Analysis of interatomic Contacts of Structural Units in PDB entry:
5FA6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FA6 entry

There are 2 chains in PDB entry 5FA6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 70SER 680
B
 SER 70SER 680
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 5FA6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
71 79Right-handed alpha
Helix 2
AA2
A
92 105Right-handed alpha
Helix 3
AA3
A
106 109Right-handed 310
Helix 4
AA4
A
116 120Right-handed 310
Helix 5
AA5
A
121 131Right-handed 310
Helix 6
AA6
A
149 151Right-handed 310
Helix 7
AA7
A
152 162Right-handed alpha
Helix 8
AA8
A
185 199Right-handed alpha
Helix 9
AA9
A
214 235Right-handed alpha
Helix 10
AB1
A
257 261Right-handed 310
Helix 11
AB2
A
330 341Right-handed alpha
Helix 12
AB3
A
370 377Right-handed alpha
Helix 13
AB4
A
385 393Right-handed alpha
Helix 14
AB5
A
394 396Right-handed 310
Helix 15
AB6
A
398 408Right-handed alpha
Helix 16
AB7
A
413 423Right-handed alpha
Helix 17
AB8
A
429 437Right-handed alpha
Helix 18
AB9
A
443 451Right-handed alpha
Helix 19
AC1
A
491 499Right-handed alpha
Helix 20
AC2
A
536 539Right-handed 310
Helix 21
AC3
A
540 556Right-handed alpha
Helix 22
AC4
A
578 588Right-handed alpha
Helix 23
AC5
A
607 615Right-handed alpha
Helix 24
AC6
A
615 625Right-handed alpha
Helix 25
AC7
A
637 655Right-handed alpha
Helix 26
AC8
A
657 671Right-handed alpha
Helix 27
AC9
B
71 79Right-handed alpha
Helix 28
AD1
B
92 105Right-handed alpha
Helix 29
AD2
B
106 109Right-handed 310
Helix 30
AD3
B
116 120Right-handed 310
Helix 31
AD4
B
121 131Right-handed 310
Helix 32
AD5
B
152 162Right-handed alpha
Helix 33
AD6
B
185 198Right-handed alpha
Helix 34
AD7
B
214 235Right-handed alpha
Helix 35
AD8
B
257 261Right-handed 310
Helix 36
AD9
B
330 340Right-handed alpha
Helix 37
AE1
B
370 376Right-handed alpha
Helix 38
AE2
B
385 394Right-handed alpha
Helix 39
AE3
B
399 408Right-handed alpha
Helix 40
AE4
B
412 423Right-handed alpha
Helix 41
AE5
B
429 437Right-handed alpha
Helix 42
AE6
B
443 451Right-handed alpha
Helix 43
AE7
B
491 499Right-handed alpha
Helix 44
AE8
B
536 539Right-handed 310
Helix 45
AE9
B
540 556Right-handed alpha
Helix 46
AF1
B
578 588Right-handed alpha
Helix 47
AF2
B
607 615Right-handed alpha
Helix 48
AF3
B
615 625Right-handed alpha
Helix 49
AF4
B
637 654Right-handed alpha
Helix 50
AF5
B
657 671Right-handed alpha
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There are 11 sheets in PDB entry 5FA6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 115first strand
Strand 2
A
83 88parallel
Strand 3
A
135 141parallel
Strand 4
A
170 177parallel
Strand 5
A
201 210parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 252first strand
Strand 2
A
348 353anti-parallel
Strand 3
A
368 369anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
457 460first strand
Strand 2
A
322 325anti-parallel
Strand 3
A
511 517anti-parallel
Strand 4
A
285 294anti-parallel
Strand 5
A
303 309anti-parallel
Strand 6
A
471 477anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
480 482first strand
Strand 2
A
488 490anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
593 598first strand
Strand 2
A
563 569parallel
Strand 3
A
531 534parallel
Strand 4
A
628 634parallel
Strand 5
A
674 679parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 115first strand
Strand 2
B
83 88parallel
Strand 3
B
135 143parallel
Strand 4
B
170 177parallel
Strand 5
B
201 202parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 148first strand
Strand 2
B
135 143anti-parallel
Strand 3
B
170 177parallel
Strand 4
B
207 210parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
248 252first strand
Strand 2
B
348 353anti-parallel
Strand 3
B
368 369anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
457 460first strand
Strand 2
B
322 325anti-parallel
Strand 3
B
511 517anti-parallel
Strand 4
B
285 294anti-parallel
Strand 5
B
303 309anti-parallel
Strand 6
B
471 477anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
480 482first strand
Strand 2
B
488 490anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
593 598first strand
Strand 2
B
563 569parallel
Strand 3
B
531 534parallel
Strand 4
B
628 634parallel
Strand 5
B
674 679parallel
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