Analysis of interatomic Contacts of Structural Units in PDB entry:
5FAN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FAN entry

There is 1 chain in PDB entry 5FAN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1PHE 446
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 5FAN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 31Right-handed alpha
Helix 2
AA2
A
61 73Right-handed alpha
Helix 3
AA3
A
76 81Right-handed 310
Helix 4
AA4
A
111 116Right-handed 310
Helix 5
AA5
A
121 126Right-handed alpha
Helix 6
AA6
A
167 184Right-handed alpha
Helix 7
AA7
A
195 199Right-handed 310
Helix 8
AA8
A
210 214Right-handed 310
Helix 9
AA9
A
245 255Right-handed alpha
Helix 10
AB1
A
266 283Right-handed alpha
Helix 11
AB2
A
300 302Right-handed 310
Helix 12
AB3
A
325 331Right-handed alpha
Helix 13
AB4
A
331 345Right-handed alpha
Helix 14
AB5
A
347 360Right-handed alpha
Helix 15
AB6
A
363 368Right-handed 310
Helix 16
AB7
A
370 375Right-handed alpha
Helix 17
AB8
A
433 443Right-handed alpha
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There are 4 sheets in PDB entry 5FAN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 11first strand
Strand 2
A
100 107anti-parallel
Strand 3
A
143 150parallel
Strand 4
A
155 162anti-parallel
Strand 5
A
35 42anti-parallel
Strand 6
A
401 404anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 22first strand
Strand 2
A
91 95anti-parallel
Strand 3
A
82 85anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 244first strand
Strand 2
A
425 432anti-parallel
Strand 3
A
412 417anti-parallel
Strand 4
A
379 383parallel
Strand 5
A
290 298parallel
Strand 6
A
316 319anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 244first strand
Strand 2
A
425 432anti-parallel
Strand 3
A
412 417anti-parallel
Strand 4
A
379 383parallel
Strand 5
A
290 298parallel
Strand 6
A
322 324anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il