Analysis of interatomic Contacts of Structural Units in PDB entry:
5FB3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FB3 entry

There are 6 chains in PDB entry 5FB3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3ILE 338
B
 LYS 3ILE 338
C
 LYS 3ILE 338
D
 LYS 3ILE 338
E
 LYS 2ILE 338
F
 LYS 2ILE 338
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are115 helices in PDB entry 5FB3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 27Right-handed 310
Helix 2
AA2
A
42 53Right-handed alpha
Helix 3
AA3
A
63 65Right-handed 310
Helix 4
AA4
A
80 95Right-handed alpha
Helix 5
AA5
A
123 127Right-handed 310
Helix 6
AA6
A
140 145Right-handed alpha
Helix 7
AA7
A
147 160Right-handed alpha
Helix 8
AA8
A
160 176Right-handed alpha
Helix 9
AA9
A
180 197Right-handed alpha
Helix 10
AB1
A
197 202Right-handed alpha
Helix 11
AB2
A
206 228Right-handed alpha
Helix 12
AB3
A
230 234Right-handed 310
Helix 13
AB4
A
235 248Right-handed alpha
Helix 14
AB5
A
250 254Right-handed 310
Helix 15
AB6
A
255 272Right-handed alpha
Helix 16
AB7
A
274 286Right-handed alpha
Helix 17
AB8
A
297 308Right-handed alpha
Helix 18
AB9
A
309 311Right-handed 310
Helix 19
AC1
A
324 335Right-handed alpha
Helix 20
AC2
B
18 21Right-handed 310
Helix 21
AC3
B
22 27Right-handed alpha
Helix 22
AC4
B
42 51Right-handed alpha
Helix 23
AC5
B
80 94Right-handed alpha
Helix 24
AC6
B
107 111Right-handed 310
Helix 25
AC7
B
116 121Right-handed alpha
Helix 26
AC8
B
140 146Right-handed alpha
Helix 27
AC9
B
147 160Right-handed alpha
Helix 28
AD1
B
160 176Right-handed alpha
Helix 29
AD2
B
180 202Right-handed alpha
Helix 30
AD3
B
207 228Right-handed alpha
Helix 31
AD4
B
235 246Right-handed alpha
Helix 32
AD5
B
255 272Right-handed alpha
Helix 33
AD6
B
274 286Right-handed alpha
Helix 34
AD7
B
297 308Right-handed alpha
Helix 35
AD8
B
309 311Right-handed 310
Helix 36
AD9
B
324 335Right-handed alpha
Helix 37
AE1
C
18 27Right-handed 310
Helix 38
AE2
C
42 52Right-handed alpha
Helix 39
AE3
C
61 65Right-handed 310
Helix 40
AE4
C
80 95Right-handed alpha
Helix 41
AE5
C
108 112Right-handed 310
Helix 42
AE6
C
123 127Right-handed 310
Helix 43
AE7
C
140 145Right-handed alpha
Helix 44
AE8
C
147 160Right-handed alpha
Helix 45
AE9
C
160 176Right-handed alpha
Helix 46
AF1
C
180 197Right-handed alpha
Helix 47
AF2
C
197 202Right-handed alpha
Helix 48
AF3
C
206 228Right-handed alpha
Helix 49
AF4
C
235 246Right-handed alpha
Helix 50
AF5
C
250 254Right-handed 310
Helix 51
AF6
C
255 272Right-handed alpha
Helix 52
AF7
C
275 286Right-handed alpha
Helix 53
AF8
C
291 295Right-handed 310
Helix 54
AF9
C
297 306Right-handed alpha
Helix 55
AG1
C
307 311Right-handed 310
Helix 56
AG2
C
324 335Right-handed alpha
Helix 57
AG3
D
18 27Right-handed 310
Helix 58
AG4
D
42 53Right-handed alpha
Helix 59
AG5
D
80 94Right-handed alpha
Helix 60
AG6
D
107 111Right-handed 310
Helix 61
AG7
D
116 123Right-handed alpha
Helix 62
AG8
D
124 127Right-handed 310
Helix 63
AG9
D
139 145Right-handed alpha
Helix 64
AH1
D
147 160Right-handed alpha
Helix 65
AH2
D
160 176Right-handed alpha
Helix 66
AH3
D
180 202Right-handed alpha
Helix 67
AH4
D
206 228Right-handed alpha
Helix 68
AH5
D
230 234Right-handed 310
Helix 69
AH6
D
235 246Right-handed alpha
Helix 70
AH7
D
250 254Right-handed 310
Helix 71
AH8
D
255 272Right-handed alpha
Helix 72
AH9
D
274 286Right-handed alpha
Helix 73
AI1
D
297 308Right-handed alpha
Helix 74
AI2
D
309 311Right-handed 310
Helix 75
AI3
D
324 335Right-handed alpha
Helix 76
AI4
E
18 27Right-handed 310
Helix 77
AI5
E
42 53Right-handed alpha
Helix 78
AI6
E
63 65Right-handed 310
Helix 79
AI7
E
80 95Right-handed alpha
Helix 80
AI8
E
107 111Right-handed 310
Helix 81
AI9
E
116 123Right-handed alpha
Helix 82
AJ1
E
124 127Right-handed 310
Helix 83
AJ2
E
140 144Right-handed alpha
Helix 84
AJ3
E
147 160Right-handed alpha
Helix 85
AJ4
E
160 176Right-handed alpha
Helix 86
AJ5
E
180 202Right-handed alpha
Helix 87
AJ6
E
206 228Right-handed alpha
Helix 88
AJ7
E
235 246Right-handed alpha
Helix 89
AJ8
E
255 272Right-handed alpha
Helix 90
AJ9
E
274 286Right-handed alpha
Helix 91
AK1
E
290 295Right-handed alpha
Helix 92
AK2
E
297 308Right-handed alpha
Helix 93
AK3
E
309 311Right-handed 310
Helix 94
AK4
E
324 335Right-handed alpha
Helix 95
AK5
F
18 27Right-handed 310
Helix 96
AK6
F
42 52Right-handed alpha
Helix 97
AK7
F
63 65Right-handed 310
Helix 98
AK8
F
80 95Right-handed alpha
Helix 99
AK9
F
107 111Right-handed 310
Helix 100
AL1
F
116 123Right-handed alpha
Helix 101
AL2
F
124 127Right-handed 310
Helix 102
AL3
F
140 144Right-handed alpha
Helix 103
AL4
F
147 160Right-handed alpha
Helix 104
AL5
F
160 176Right-handed alpha
Helix 105
AL6
F
180 202Right-handed alpha
Helix 106
AL7
F
206 228Right-handed alpha
Helix 107
AL8
F
230 234Right-handed 310
Helix 108
AL9
F
235 246Right-handed alpha
Helix 109
AM1
F
250 254Right-handed 310
Helix 110
AM2
F
255 272Right-handed alpha
Helix 111
AM3
F
274 286Right-handed alpha
Helix 112
AM4
F
290 295Right-handed alpha
Helix 113
AM5
F
297 308Right-handed alpha
Helix 114
AM6
F
309 311Right-handed 310
Helix 115
AM7
F
324 335Right-handed alpha
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There are 6 sheets in PDB entry 5FB3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 8first strand
Strand 2
B
12 16anti-parallel
Strand 3
B
135 139parallel
Strand 4
B
98 102parallel
Strand 5
B
75 79parallel
Strand 6
B
34 36parallel
Strand 7
B
58 59parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 61first strand
Strand 2
A
33 37parallel
Strand 3
A
74 79parallel
Strand 4
A
98 102parallel
Strand 5
A
135 139parallel
Strand 6
A
12 16parallel
Strand 7
B
5 8anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
5 8first strand
Strand 2
D
12 15anti-parallel
Strand 3
D
135 138parallel
Strand 4
D
98 102parallel
Strand 5
D
74 79parallel
Strand 6
D
33 37parallel
Strand 7
D
57 61parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
33 37first strand
Strand 2
C
74 79parallel
Strand 3
C
98 102parallel
Strand 4
C
135 139parallel
Strand 5
C
12 16parallel
Strand 6
D
5 8anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
5 8first strand
Strand 2
F
12 16anti-parallel
Strand 3
F
135 139parallel
Strand 4
F
98 102parallel
Strand 5
F
74 79parallel
Strand 6
F
33 37parallel
Strand 7
F
57 61parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
57 61first strand
Strand 2
E
33 37parallel
Strand 3
E
74 79parallel
Strand 4
E
98 102parallel
Strand 5
E
133 139parallel
Strand 6
E
12 16parallel
Strand 7
F
5 8anti-parallel
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