Analysis of interatomic Contacts of Structural Units in PDB entry:
5FBK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FBK entry

There are 6 chains in PDB entry 5FBK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 22ILE 235
A
 ILE 237GLU 481
A
 GLY 483PHE 539
B
 GLY 21ILE 235
B
 ILE 237GLU 481
B
 GLY 483SER 531
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 5FBK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
64 83Right-handed alpha
Helix 2
AA2
A
103 115Right-handed alpha
Helix 3
AA3
A
115 124Right-handed alpha
Helix 4
AA4
A
124 129Right-handed alpha
Helix 5
AA5
A
146 160Right-handed alpha
Helix 6
AA6
A
171 176Right-handed 310
Helix 7
AA7
A
190 204Right-handed alpha
Helix 8
AA8
A
218 233Right-handed alpha
Helix 9
AA9
A
248 262Right-handed alpha
Helix 10
AB1
A
272 286Right-handed alpha
Helix 11
AB2
A
296 301Right-handed alpha
Helix 12
AB3
A
307 309Right-handed 310
Helix 13
AB4
A
310 315Right-handed alpha
Helix 14
AB5
A
329 336Right-handed alpha
Helix 15
AB6
A
347 357Right-handed alpha
Helix 16
AB7
A
400 404Right-handed 310
Helix 17
AB8
A
415 436Right-handed alpha
Helix 18
AB9
A
444 448Right-handed 310
Helix 19
AC1
A
451 455Right-handed 310
Helix 20
AC2
A
456 466Right-handed alpha
Helix 21
AC3
A
525 528Right-handed 310
Helix 22
AC4
A
529 533Right-handed 310
Helix 23
AC5
B
64 83Right-handed alpha
Helix 24
AC6
B
103 115Right-handed alpha
Helix 25
AC7
B
115 121Right-handed alpha
Helix 26
AC8
B
146 158Right-handed alpha
Helix 27
AC9
B
159 161Right-handed 310
Helix 28
AD1
B
171 176Right-handed 310
Helix 29
AD2
B
189 204Right-handed alpha
Helix 30
AD3
B
218 233Right-handed alpha
Helix 31
AD4
B
248 262Right-handed alpha
Helix 32
AD5
B
272 286Right-handed alpha
Helix 33
AD6
B
296 301Right-handed alpha
Helix 34
AD7
B
307 309Right-handed 310
Helix 35
AD8
B
310 315Right-handed alpha
Helix 36
AD9
B
329 336Right-handed alpha
Helix 37
AE1
B
347 357Right-handed alpha
Helix 38
AE2
B
400 404Right-handed 310
Helix 39
AE3
B
415 436Right-handed alpha
Helix 40
AE4
B
444 448Right-handed 310
Helix 41
AE5
B
451 455Right-handed 310
Helix 42
AE6
B
456 466Right-handed alpha
Helix 43
AE7
B
525 528Right-handed 310
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There are 8 sheets in PDB entry 5FBK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 28first strand
Strand 2
A
93 99anti-parallel
Strand 3
A
32 38parallel
Strand 4
A
138 142parallel
Strand 5
A
164 166parallel
Strand 6
A
183 185parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 44first strand
Strand 2
A
60 63anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 243first strand
Strand 2
A
209 214parallel
Strand 3
A
266 270parallel
Strand 4
A
292 295parallel
Strand 5
A
318 322parallel
Strand 6
A
489 496anti-parallel
Strand 7
A
503 511anti-parallel
Strand 8
A
521 523anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
468 470first strand
Strand 2
A
476 478anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 28first strand
Strand 2
B
93 99anti-parallel
Strand 3
B
32 38parallel
Strand 4
B
138 142parallel
Strand 5
B
164 166parallel
Strand 6
B
183 185parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 44first strand
Strand 2
B
60 63anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
236 243first strand
Strand 2
B
208 214parallel
Strand 3
B
266 270parallel
Strand 4
B
292 295parallel
Strand 5
B
318 322parallel
Strand 6
B
489 496anti-parallel
Strand 7
B
503 511anti-parallel
Strand 8
B
521 523anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
469 470first strand
Strand 2
B
476 477anti-parallel
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