Analysis of interatomic Contacts of Structural Units in PDB entry:
5FBS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FBS entry

There is 1 chain in PDB entry 5FBS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2ILE 865
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 5FBS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 11Right-handed 310
Helix 2
AA2
A
15 20Right-handed alpha
Helix 3
AA3
A
20 30Right-handed alpha
Helix 4
AA4
A
46 51Right-handed alpha
Helix 5
AA5
A
57 61Right-handed 310
Helix 6
AA6
A
82 90Right-handed alpha
Helix 7
AA7
A
93 106Right-handed alpha
Helix 8
AA8
A
142 156Right-handed alpha
Helix 9
AA9
A
157 159Right-handed 310
Helix 10
AB1
A
261 266Right-handed alpha
Helix 11
AB2
A
272 291Right-handed alpha
Helix 12
AB3
A
333 337Right-handed alpha
Helix 13
AB4
A
344 355Right-handed alpha
Helix 14
AB5
A
371 375Right-handed 310
Helix 15
AB6
A
376 385Right-handed alpha
Helix 16
AB7
A
391 403Right-handed alpha
Helix 17
AB8
A
436 456Right-handed alpha
Helix 18
AB9
A
461 479Right-handed alpha
Helix 19
AC1
A
480 493Right-handed alpha
Helix 20
AC2
A
512 516Right-handed 310
Helix 21
AC3
A
521 538Right-handed alpha
Helix 22
AC4
A
540 544Right-handed 310
Helix 23
AC5
A
545 549Right-handed 310
Helix 24
AC6
A
554 558Right-handed 310
Helix 25
AC7
A
564 579Right-handed alpha
Helix 26
AC8
A
597 600Right-handed 310
Helix 27
AC9
A
601 610Right-handed alpha
Helix 28
AD1
A
615 632Right-handed alpha
Helix 29
AD2
A
651 661Right-handed alpha
Helix 30
AD3
A
662 666Right-handed 310
Helix 31
AD4
A
667 694Right-handed alpha
Helix 32
AD5
A
700 706Right-handed 310
Helix 33
AD6
A
707 718Right-handed alpha
Helix 34
AD7
A
721 737Right-handed alpha
Helix 35
AD8
A
802 810Right-handed 310
Helix 36
AD9
A
824 834Right-handed alpha
Helix 37
AE1
A
843 848Right-handed alpha
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There are 5 sheets in PDB entry 5FBS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 7first strand
Strand 2
A
40 43anti-parallel
Strand 3
A
179 184anti-parallel
Strand 4
A
114 119anti-parallel
Strand 5
A
136 140anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
236 240first strand
Strand 2
A
227 231anti-parallel
Strand 3
A
207 213anti-parallel
Strand 4
A
190 195anti-parallel
Strand 5
A
294 301anti-parallel
Strand 6
A
304 312anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 249first strand
Strand 2
A
256 259anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
360 362first strand
Strand 2
A
365 369anti-parallel
Strand 3
A
329 332anti-parallel
Strand 4
A
743 745anti-parallel
Strand 5
A
750 751anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
768 771first strand
Strand 2
A
837 839anti-parallel
Strand 3
A
812 817parallel
Strand 4
A
794 798parallel
Strand 5
A
775 781parallel
Strand 6
A
853 856anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il