Analysis of interatomic Contacts of Structural Units in PDB entry:
5FBU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FBU entry

There is 1 chain in PDB entry 5FBU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2ASP 867
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 5FBU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 30Right-handed alpha
Helix 2
AA2
A
48 52Right-handed 310
Helix 3
AA3
A
58 66Right-handed alpha
Helix 4
AA4
A
76 78Right-handed 310
Helix 5
AA5
A
79 84Right-handed alpha
Helix 6
AA6
A
84 89Right-handed alpha
Helix 7
AA7
A
96 101Right-handed alpha
Helix 8
AA8
A
143 164Right-handed alpha
Helix 9
AA9
A
274 289Right-handed alpha
Helix 10
AB1
A
333 337Right-handed alpha
Helix 11
AB2
A
344 353Right-handed alpha
Helix 12
AB3
A
370 376Right-handed alpha
Helix 13
AB4
A
377 388Right-handed alpha
Helix 14
AB5
A
391 404Right-handed alpha
Helix 15
AB6
A
433 455Right-handed alpha
Helix 16
AB7
A
456 458Right-handed 310
Helix 17
AB8
A
460 479Right-handed alpha
Helix 18
AB9
A
480 505Right-handed alpha
Helix 19
AC1
A
510 515Right-handed alpha
Helix 20
AC2
A
521 538Right-handed alpha
Helix 21
AC3
A
540 548Right-handed alpha
Helix 22
AC4
A
554 559Right-handed 310
Helix 23
AC5
A
564 580Right-handed alpha
Helix 24
AC6
A
597 600Right-handed 310
Helix 25
AC7
A
601 612Right-handed alpha
Helix 26
AC8
A
615 640Right-handed alpha
Helix 27
AC9
A
644 663Right-handed alpha
Helix 28
AD1
A
664 666Right-handed 310
Helix 29
AD2
A
667 694Right-handed alpha
Helix 30
AD3
A
699 706Right-handed 310
Helix 31
AD4
A
707 718Right-handed alpha
Helix 32
AD5
A
721 736Right-handed alpha
Helix 33
AD6
A
784 788Right-handed 310
Helix 34
AD7
A
802 809Right-handed 310
Helix 35
AD8
A
826 833Right-handed alpha
Helix 36
AD9
A
843 848Right-handed alpha
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There are 3 sheets in PDB entry 5FBU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
236 240first strand
Strand 2
A
228 231anti-parallel
Strand 3
A
207 210anti-parallel
Strand 4
A
193 195anti-parallel
Strand 5
A
294 298anti-parallel
Strand 6
A
307 312anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 362first strand
Strand 2
A
365 369anti-parallel
Strand 3
A
329 332anti-parallel
Strand 4
A
743 745anti-parallel
Strand 5
A
750 751anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
765 766first strand
Strand 2
A
862 865anti-parallel
Strand 3
A
853 857anti-parallel
Strand 4
A
774 781anti-parallel
Strand 5
A
794 798parallel
Strand 6
A
815 817parallel
Strand 7
A
837 839parallel
Strand 8
A
768 771anti-parallel
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