Analysis of interatomic Contacts of Structural Units in PDB entry:
5FCS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FCS entry

There are 2 chains in PDB entry 5FCS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
H
 GLN 1CYS 239
L
 SER 2CYS 246
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 5FCS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
H
30 34Right-handed 310
Helix 2
AA2
H
81 85Right-handed 310
Helix 3
AA3
H
146 149Right-handed 310
Helix 4
AA4
H
180 183Right-handed 310
Helix 5
AA5
H
205 209Right-handed 310
Helix 6
AA6
L
80 84Right-handed 310
Helix 7
AA7
L
146 150Right-handed 310
Helix 8
AA8
L
171 175Right-handed 310
Helix 9
AA9
L
194 196Right-handed 310
Helix 10
AB1
L
207 211Right-handed 310
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There are 11 sheets in PDB entry 5FCS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
4 6first strand
Strand 2
H
17 24anti-parallel
Strand 3
H
72 78anti-parallel
Strand 4
H
64 69anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
9 12first strand
Strand 2
H
104 108parallel
Strand 3
H
86 93anti-parallel
Strand 4
H
36 40anti-parallel
Strand 5
H
47 51anti-parallel
Strand 6
H
55 56anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
9 12first strand
Strand 2
H
104 108parallel
Strand 3
H
86 93anti-parallel
Strand 4
H
98 100anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
120 124first strand
Strand 2
H
136 144anti-parallel
Strand 3
H
196 201anti-parallel
Strand 4
H
186 191anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
128 130first strand
Strand 2
H
230 234parallel
Strand 3
H
210 216anti-parallel
Strand 4
H
151 157anti-parallel
Strand 5
H
164 170anti-parallel
Strand 6
H
176 178anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
9 12first strand
Strand 2
L
105 109parallel
Strand 3
L
85 93anti-parallel
Strand 4
L
34 39anti-parallel
Strand 5
L
46 49anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
9 12first strand
Strand 2
L
105 109parallel
Strand 3
L
85 93anti-parallel
Strand 4
L
98 101anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
18 23first strand
Strand 2
L
71 76anti-parallel
Strand 3
L
63 68anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
121 125first strand
Strand 2
L
136 143anti-parallel
Strand 3
L
198 203anti-parallel
Strand 4
L
188 193anti-parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
128 130first strand
Strand 2
L
237 241parallel
Strand 3
L
212 221anti-parallel
Strand 4
L
152 157anti-parallel
Strand 5
L
163 169anti-parallel
Strand 6
L
178 180anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
128 130first strand
Strand 2
L
237 241parallel
Strand 3
L
212 221anti-parallel
Strand 4
L
227 233anti-parallel
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