Analysis of interatomic Contacts of Structural Units in PDB entry:
5FD4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FD4 entry

There are 2 chains in PDB entry 5FD4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO -4GLN 304
B
 PRO -4GLN 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 5FD4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 22Right-handed alpha
Helix 2
AA2
A
25 31Right-handed alpha
Helix 3
AA3
A
37 46Right-handed alpha
Helix 4
AA4
A
52 63Right-handed alpha
Helix 5
AA5
A
66 71Right-handed alpha
Helix 6
AA6
A
78 91Right-handed alpha
Helix 7
AA7
A
96 114Right-handed alpha
Helix 8
AA8
A
115 118Right-handed 310
Helix 9
AA9
A
119 131Right-handed alpha
Helix 10
AB1
A
144 158Right-handed alpha
Helix 11
AB2
A
162 179Right-handed alpha
Helix 12
AB3
A
183 200Right-handed alpha
Helix 13
AB4
A
204 206Right-handed 310
Helix 14
AB5
A
207 225Right-handed alpha
Helix 15
AB6
A
230 246Right-handed alpha
Helix 16
AB7
A
250 265Right-handed alpha
Helix 17
AB8
A
268 286Right-handed alpha
Helix 18
AB9
A
288 302Right-handed alpha
Helix 19
AC1
B
-3 2Right-handed alpha
Helix 20
AC2
B
7 22Right-handed alpha
Helix 21
AC3
B
25 31Right-handed alpha
Helix 22
AC4
B
37 46Right-handed alpha
Helix 23
AC5
B
52 63Right-handed alpha
Helix 24
AC6
B
66 71Right-handed alpha
Helix 25
AC7
B
78 91Right-handed alpha
Helix 26
AC8
B
96 114Right-handed alpha
Helix 27
AC9
B
115 118Right-handed 310
Helix 28
AD1
B
119 131Right-handed alpha
Helix 29
AD2
B
144 158Right-handed alpha
Helix 30
AD3
B
162 177Right-handed alpha
Helix 31
AD4
B
183 200Right-handed alpha
Helix 32
AD5
B
204 206Right-handed 310
Helix 33
AD6
B
207 225Right-handed alpha
Helix 34
AD7
B
230 246Right-handed alpha
Helix 35
AD8
B
250 265Right-handed alpha
Helix 36
AD9
B
268 286Right-handed alpha
Helix 37
AE1
B
288 302Right-handed alpha
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There are no sheets in PDB entry 5FD4
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