Analysis of interatomic Contacts of Structural Units in PDB entry:
5FH9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FH9 entry

There are 2 chains in PDB entry 5FH9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 264
B
 MET 1SER 260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 5FH9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 25Right-handed alpha
Helix 2
AA2
A
71 84Right-handed alpha
Helix 3
AA3
A
97 112Right-handed alpha
Helix 4
AA4
A
121 128Right-handed alpha
Helix 5
AA5
A
133 142Right-handed alpha
Helix 6
AA6
A
154 165Right-handed alpha
Helix 7
AA7
A
178 190Right-handed alpha
Helix 8
AA8
A
197 211Right-handed alpha
Helix 9
AA9
A
212 220Right-handed alpha
Helix 10
AB1
A
221 224Right-handed 310
Helix 11
AB2
A
225 237Right-handed alpha
Helix 12
AB3
A
239 259Right-handed alpha
Helix 13
AB4
B
15 25Right-handed alpha
Helix 14
AB5
B
73 84Right-handed alpha
Helix 15
AB6
B
97 112Right-handed alpha
Helix 16
AB7
B
121 128Right-handed alpha
Helix 17
AB8
B
133 142Right-handed alpha
Helix 18
AB9
B
154 165Right-handed alpha
Helix 19
AC1
B
178 190Right-handed alpha
Helix 20
AC2
B
197 211Right-handed alpha
Helix 21
AC3
B
215 220Right-handed alpha
Helix 22
AC4
B
221 237Right-handed alpha
Helix 23
AC5
B
239 260Right-handed alpha
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There are 3 sheets in PDB entry 5FH9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 32first strand
Strand 2
A
39 46anti-parallel
Strand 3
A
50 56anti-parallel
Strand 4
A
2 10parallel
Strand 5
A
88 94parallel
Strand 6
A
115 120parallel
Strand 7
A
145 147parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 132first strand
Strand 2
A
260 262anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 32first strand
Strand 2
B
39 46anti-parallel
Strand 3
B
50 56anti-parallel
Strand 4
B
2 10parallel
Strand 5
B
88 94parallel
Strand 6
B
115 120parallel
Strand 7
B
145 147parallel
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