Analysis of interatomic Contacts of Structural Units in PDB entry:
5FHD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FHD entry

There are 4 chains in PDB entry 5FHD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3LEU 432
C
 T 3 G 10
E
 T 3 C 9
B
 MET 1LEU 432
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 5FHD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 20Right-handed alpha
Helix 2
AA2
A
33 45Right-handed alpha
Helix 3
AA3
A
55 63Right-handed alpha
Helix 4
AA4
A
67 72Right-handed alpha
Helix 5
AA5
A
89 99Right-handed alpha
Helix 6
AA6
A
106 110Right-handed 310
Helix 7
AA7
A
111 127Right-handed alpha
Helix 8
AA8
A
130 135Right-handed 310
Helix 9
AA9
A
151 159Right-handed alpha
Helix 10
AB1
A
166 175Right-handed 310
Helix 11
AB2
A
191 203Right-handed alpha
Helix 12
AB3
A
207 212Right-handed alpha
Helix 13
AB4
A
213 218Right-handed 310
Helix 14
AB5
A
236 249Right-handed alpha
Helix 15
AB6
A
265 269Right-handed 310
Helix 16
AB7
A
289 293Right-handed 310
Helix 17
AB8
A
360 364Right-handed alpha
Helix 18
AB9
A
382 390Right-handed alpha
Helix 19
AC1
A
404 408Right-handed 310
Helix 20
AC2
A
411 424Right-handed alpha
Helix 21
AC3
B
7 20Right-handed alpha
Helix 22
AC4
B
33 45Right-handed alpha
Helix 23
AC5
B
55 63Right-handed alpha
Helix 24
AC6
B
67 72Right-handed alpha
Helix 25
AC7
B
89 99Right-handed alpha
Helix 26
AC8
B
106 110Right-handed 310
Helix 27
AC9
B
111 127Right-handed alpha
Helix 28
AD1
B
130 135Right-handed 310
Helix 29
AD2
B
151 160Right-handed alpha
Helix 30
AD3
B
166 175Right-handed 310
Helix 31
AD4
B
191 203Right-handed alpha
Helix 32
AD5
B
207 213Right-handed alpha
Helix 33
AD6
B
214 218Right-handed 310
Helix 34
AD7
B
236 249Right-handed alpha
Helix 35
AD8
B
360 364Right-handed alpha
Helix 36
AD9
B
382 390Right-handed alpha
Helix 37
AE1
B
404 408Right-handed 310
Helix 38
AE2
B
411 424Right-handed alpha
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There are 10 sheets in PDB entry 5FHD. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 66first strand
Strand 2
A
49 53parallel
Strand 3
A
101 104parallel
Strand 4
A
136 141parallel
Strand 5
A
23 28parallel
Strand 6
A
177 183parallel
Strand 7
A
427 429anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
358 359first strand
Strand 2
A
231 234parallel
Strand 3
A
371 374parallel
Strand 4
A
397 399parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 257first strand
Strand 2
A
274 277anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 261first strand
Strand 2
A
345 349anti-parallel
Strand 3
A
325 329anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 354first strand
Strand 2
A
282 285anti-parallel
Strand 3
A
299 305anti-parallel
Strand 4
A
310 314anti-parallel
Strand 5
A
319 322anti-parallel
Strand 6
B
224 225anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 66first strand
Strand 2
B
49 53parallel
Strand 3
B
101 104parallel
Strand 4
B
136 140parallel
Strand 5
B
23 28parallel
Strand 6
B
177 183parallel
Strand 7
B
427 429anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
357 359first strand
Strand 2
B
231 234parallel
Strand 3
B
371 374parallel
Strand 4
B
397 399parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
254 255first strand
Strand 2
B
275 276anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
319 320first strand
Strand 2
B
312 314anti-parallel
Strand 3
B
299 302anti-parallel
Strand 4
B
282 285anti-parallel
Strand 5
B
352 354anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
325 327first strand
Strand 2
B
347 349anti-parallel
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