Analysis of interatomic Contacts of Structural Units in PDB entry:
5FHE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FHE entry

There are 2 chains in PDB entry 5FHE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3LEU 432
C
 T 3 T 8
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 5FHE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 15Right-handed alpha
Helix 2
AA2
A
33 44Right-handed alpha
Helix 3
AA3
A
55 63Right-handed alpha
Helix 4
AA4
A
67 72Right-handed alpha
Helix 5
AA5
A
89 99Right-handed alpha
Helix 6
AA6
A
106 110Right-handed 310
Helix 7
AA7
A
111 126Right-handed alpha
Helix 8
AA8
A
130 134Right-handed 310
Helix 9
AA9
A
152 160Right-handed alpha
Helix 10
AB1
A
166 175Right-handed 310
Helix 11
AB2
A
191 203Right-handed alpha
Helix 12
AB3
A
209 216Right-handed 310
Helix 13
AB4
A
236 247Right-handed alpha
Helix 14
AB5
A
382 390Right-handed alpha
Helix 15
AB6
A
404 408Right-handed 310
Helix 16
AB7
A
411 424Right-handed alpha
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There are 5 sheets in PDB entry 5FHE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 66first strand
Strand 2
A
49 53parallel
Strand 3
A
101 104parallel
Strand 4
A
136 140parallel
Strand 5
A
23 28parallel
Strand 6
A
177 183parallel
Strand 7
A
427 429anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
357 359first strand
Strand 2
A
231 234parallel
Strand 3
A
371 374parallel
Strand 4
A
397 399parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 257first strand
Strand 2
A
274 277anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 260first strand
Strand 2
A
339 349anti-parallel
Strand 3
A
325 334anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
319 322first strand
Strand 2
A
310 314anti-parallel
Strand 3
A
299 305anti-parallel
Strand 4
A
282 285anti-parallel
Strand 5
A
352 354anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il