Analysis of interatomic Contacts of Structural Units in PDB entry:
5FHY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FHY entry

There are 2 chains in PDB entry 5FHY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 80GLY 308
B
 ASP 80GLY 308
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 5FHY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
146 158Right-handed alpha
Helix 2
AA2
A
204 208Right-handed 310
Helix 3
AA3
A
283 297Right-handed alpha
Helix 4
AA4
B
146 158Right-handed alpha
Helix 5
AA5
B
204 208Right-handed 310
Helix 6
AA6
B
280 285Right-handed alpha
Helix 7
AA7
B
285 294Right-handed alpha
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There are 10 sheets in PDB entry 5FHY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 87first strand
Strand 2
A
255 259anti-parallel
Strand 3
A
247 249anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 243first strand
Strand 2
A
232 236anti-parallel
Strand 3
A
93 101anti-parallel
Strand 4
A
269 273anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 170first strand
Strand 2
A
173 183anti-parallel
Strand 3
A
105 109anti-parallel
Strand 4
A
224 227anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 134first strand
Strand 2
A
124 130anti-parallel
Strand 3
A
138 140anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 134first strand
Strand 2
A
124 130anti-parallel
Strand 3
A
189 195anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 87first strand
Strand 2
B
255 259anti-parallel
Strand 3
B
247 249anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 243first strand
Strand 2
B
232 236anti-parallel
Strand 3
B
93 101anti-parallel
Strand 4
B
269 273anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
163 170first strand
Strand 2
B
173 180anti-parallel
Strand 3
B
107 109anti-parallel
Strand 4
B
224 227anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 134first strand
Strand 2
B
124 130anti-parallel
Strand 3
B
138 140anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 134first strand
Strand 2
B
124 130anti-parallel
Strand 3
B
189 195anti-parallel
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