Analysis of interatomic Contacts of Structural Units in PDB entry:
5FI0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5FI0 entry

There are 5 chains in PDB entry 5FI0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 0	LYS 398
B	ALA 3	CYS 178
C	ALA 38	LEU 399
D	GLN 2	PRO 179
E	GLY -2	MET 244

There are 94 helices in PDB entry 5FI0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	0	75	Right-handed alpha
Helix 2	AA2	A	75	82	Right-handed alpha
Helix 3	AA3	A	82	88	Right-handed alpha
Helix 4	AA4	A	92	101	Right-handed alpha
Helix 5	AA5	A	102	121	Right-handed alpha
Helix 6	AA6	A	131	139	Right-handed alpha
Helix 7	AA7	A	140	142	Right-handed 310
Helix 8	AA8	A	143	163	Right-handed alpha
Helix 9	AA9	A	165	179	Right-handed alpha
Helix 10	AB1	A	187	212	Right-handed alpha
Helix 11	AB2	A	219	256	Right-handed alpha
Helix 12	AB3	A	264	269	Right-handed alpha
Helix 13	AB4	A	365	367	Right-handed 310
Helix 14	AB5	A	376	398	Right-handed alpha
Helix 15	AB6	B	15	26	Right-handed alpha
Helix 16	AB7	B	60	64	Right-handed 310
Helix 17	AB8	B	67	72	Right-handed 310
Helix 18	AB9	B	86	96	Right-handed alpha
Helix 19	AC1	B	96	105	Right-handed alpha
Helix 20	AC2	B	116	120	Right-handed 310
Helix 21	AC3	B	122	132	Right-handed alpha
Helix 22	AC4	B	138	149	Right-handed alpha
Helix 23	AC5	B	164	178	Right-handed alpha
Helix 24	AC6	C	39	75	Right-handed alpha
Helix 25	AC7	C	75	82	Right-handed alpha
Helix 26	AC8	C	82	88	Right-handed alpha
Helix 27	AC9	C	92	101	Right-handed alpha
Helix 28	AD1	C	102	121	Right-handed alpha
Helix 29	AD2	C	131	139	Right-handed alpha
Helix 30	AD3	C	140	142	Right-handed 310
Helix 31	AD4	C	143	163	Right-handed alpha
Helix 32	AD5	C	165	179	Right-handed alpha
Helix 33	AD6	C	187	200	Right-handed alpha
Helix 34	AD7	C	201	212	Right-handed alpha
Helix 35	AD8	C	219	256	Right-handed alpha
Helix 36	AD9	C	264	269	Right-handed alpha
Helix 37	AE1	C	365	367	Right-handed 310
Helix 38	AE2	C	376	399	Right-handed alpha
Helix 39	AE3	D	15	25	Right-handed alpha
Helix 40	AE4	D	67	72	Right-handed 310
Helix 41	AE5	D	86	96	Right-handed alpha
Helix 42	AE6	D	96	105	Right-handed alpha
Helix 43	AE7	D	116	120	Right-handed 310
Helix 44	AE8	D	122	131	Right-handed alpha
Helix 45	AE9	D	138	149	Right-handed alpha
Helix 46	AF1	D	164	178	Right-handed alpha
Helix 47	AF2	E	-1	75	Right-handed alpha
Helix 48	AF3	E	75	82	Right-handed alpha
Helix 49	AF4	E	82	90	Right-handed alpha
Helix 50	AF5	E	92	101	Right-handed alpha
Helix 51	AF6	E	102	121	Right-handed alpha
Helix 52	AF7	E	131	139	Right-handed alpha
Helix 53	AF8	E	140	142	Right-handed 310
Helix 54	AF9	E	143	163	Right-handed alpha
Helix 55	AG1	E	165	179	Right-handed alpha
Helix 56	AG2	E	187	200	Right-handed alpha
Helix 57	AG3	E	201	212	Right-handed alpha
Helix 58	AG4	E	219	256	Right-handed alpha
Helix 59	AG5	E	264	269	Right-handed alpha
Helix 60	AG6	E	365	367	Right-handed 310
Helix 61	AG7	E	376	397	Right-handed alpha
Helix 62	AG8	F	15	26	Right-handed alpha
Helix 63	AG9	F	60	64	Right-handed 310
Helix 64	AH1	F	67	72	Right-handed 310
Helix 65	AH2	F	86	96	Right-handed alpha
Helix 66	AH3	F	96	105	Right-handed alpha
Helix 67	AH4	F	116	120	Right-handed 310
Helix 68	AH5	F	122	132	Right-handed alpha
Helix 69	AH6	F	138	149	Right-handed alpha
Helix 70	AH7	F	164	178	Right-handed alpha
Helix 71	AH8	G	-1	75	Right-handed alpha
Helix 72	AH9	G	75	82	Right-handed alpha
Helix 73	AI1	G	82	89	Right-handed alpha
Helix 74	AI2	G	92	101	Right-handed alpha
Helix 75	AI3	G	102	121	Right-handed alpha
Helix 76	AI4	G	131	139	Right-handed alpha
Helix 77	AI5	G	140	143	Right-handed 310
Helix 78	AI6	G	144	163	Right-handed alpha
Helix 79	AI7	G	165	179	Right-handed alpha
Helix 80	AI8	G	187	200	Right-handed alpha
Helix 81	AI9	G	201	212	Right-handed alpha
Helix 82	AJ1	G	219	256	Right-handed alpha
Helix 83	AJ2	G	264	269	Right-handed alpha
Helix 84	AJ3	G	365	367	Right-handed 310
Helix 85	AJ4	G	376	397	Right-handed alpha
Helix 86	AJ5	H	15	25	Right-handed alpha
Helix 87	AJ6	H	60	64	Right-handed 310
Helix 88	AJ7	H	67	72	Right-handed 310
Helix 89	AJ8	H	86	96	Right-handed alpha
Helix 90	AJ9	H	96	105	Right-handed alpha
Helix 91	AK1	H	116	120	Right-handed 310
Helix 92	AK2	H	122	132	Right-handed alpha
Helix 93	AK3	H	138	149	Right-handed alpha
Helix 94	AK4	H	164	178	Right-handed alpha

There are 8 sheets in PDB entry 5FI0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	257	258	first strand
Strand 2	A	325	332	parallel
Strand 3	A	297	303	anti-parallel
Strand 4	A	286	294	anti-parallel
Strand 5	A	272	281	anti-parallel
Strand 6	A	368	373	anti-parallel
Strand 7	A	358	363	anti-parallel
Strand 8	A	336	340	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	40	46	first strand
Strand 2	B	49	57	anti-parallel
Strand 3	B	4	10	parallel
Strand 4	B	77	83	parallel
Strand 5	B	110	115	parallel
Strand 6	B	153	156	parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	257	258	first strand
Strand 2	C	325	332	parallel
Strand 3	C	297	303	anti-parallel
Strand 4	C	286	294	anti-parallel
Strand 5	C	272	281	anti-parallel
Strand 6	C	368	373	anti-parallel
Strand 7	C	358	363	anti-parallel
Strand 8	C	336	340	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	40	46	first strand
Strand 2	D	49	57	anti-parallel
Strand 3	D	3	10	parallel
Strand 4	D	77	83	parallel
Strand 5	D	110	115	parallel
Strand 6	D	153	156	parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	257	258	first strand
Strand 2	E	325	332	parallel
Strand 3	E	297	303	anti-parallel
Strand 4	E	286	294	anti-parallel
Strand 5	E	272	281	anti-parallel
Strand 6	E	368	373	anti-parallel
Strand 7	E	358	363	anti-parallel
Strand 8	E	336	340	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	40	46	first strand
Strand 2	F	49	56	anti-parallel
Strand 3	F	3	10	parallel
Strand 4	F	77	83	parallel
Strand 5	F	110	115	parallel
Strand 6	F	153	156	parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	257	258	first strand
Strand 2	G	325	332	parallel
Strand 3	G	297	303	anti-parallel
Strand 4	G	286	294	anti-parallel
Strand 5	G	272	281	anti-parallel
Strand 6	G	368	373	anti-parallel
Strand 7	G	358	363	anti-parallel
Strand 8	G	336	340	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	40	46	first strand
Strand 2	H	49	56	anti-parallel
Strand 3	H	4	10	parallel
Strand 4	H	77	83	parallel
Strand 5	H	110	115	parallel
Strand 6	H	153	156	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5FI0

Analysis of interatomic Contacts of Structural Units in PDB entry:
5FI0