Analysis of interatomic Contacts of Structural Units in PDB entry:
5FI5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FI5 entry

There are 2 chains in PDB entry 5FI5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 14SER 355
B
 PRO 14SER 355
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 34 helices in PDB entry 5FI5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
54 62Right-handed alpha
Helix 2
AA2
A
110 115Right-handed alpha
Helix 3
AA3
A
117 121Right-handed 310
Helix 4
AA4
A
143 145Right-handed 310
Helix 5
AA5
A
153 158Right-handed alpha
Helix 6
AA6
A
159 161Right-handed 310
Helix 7
AA7
A
162 174Right-handed alpha
Helix 8
AA8
A
191 202Right-handed alpha
Helix 9
AA9
A
212 214Right-handed 310
Helix 10
AB1
A
215 224Right-handed alpha
Helix 11
AB2
A
233 240Right-handed alpha
Helix 12
AB3
A
257 263Right-handed alpha
Helix 13
AB4
A
283 289Right-handed alpha
Helix 14
AB5
A
301 316Right-handed alpha
Helix 15
AB6
A
325 327Right-handed 310
Helix 16
AB7
A
328 338Right-handed alpha
Helix 17
AB8
A
348 353Right-handed alpha
Helix 18
AB9
B
54 62Right-handed alpha
Helix 19
AC1
B
110 115Right-handed alpha
Helix 20
AC2
B
117 121Right-handed 310
Helix 21
AC3
B
143 145Right-handed 310
Helix 22
AC4
B
153 158Right-handed alpha
Helix 23
AC5
B
159 161Right-handed 310
Helix 24
AC6
B
162 174Right-handed alpha
Helix 25
AC7
B
189 202Right-handed alpha
Helix 26
AC8
B
212 214Right-handed 310
Helix 27
AC9
B
215 221Right-handed alpha
Helix 28
AD1
B
233 240Right-handed alpha
Helix 29
AD2
B
257 263Right-handed alpha
Helix 30
AD3
B
283 289Right-handed alpha
Helix 31
AD4
B
301 316Right-handed alpha
Helix 32
AD5
B
325 327Right-handed 310
Helix 33
AD6
B
328 337Right-handed alpha
Helix 34
AD7
B
349 353Right-handed alpha
Back to top of page

There are 10 sheets in PDB entry 5FI5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 22first strand
Strand 2
A
29 36anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 141first strand
Strand 2
A
43 52anti-parallel
Strand 3
A
77 85anti-parallel
Strand 4
A
97 100anti-parallel
Strand 5
A
146 147anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 141first strand
Strand 2
A
43 52anti-parallel
Strand 3
A
344 347anti-parallel
Strand 4
A
321 324parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 105first strand
Strand 2
A
125 126anti-parallel
Back to list of sheets
Back to top of page

There are 12 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 230first strand
Strand 2
A
205 210parallel
Strand 3
A
182 186parallel
Strand 4
A
244 249parallel
Strand 5
A
264 272parallel
Strand 6
A
293 296parallel
Strand 7
B
293 296anti-parallel
Strand 8
B
264 272parallel
Strand 9
B
244 249parallel
Strand 10
B
182 186parallel
Strand 11
B
205 210parallel
Strand 12
B
227 230parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
280 282first strand
Strand 2
B
280 282anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 22first strand
Strand 2
B
29 36anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 141first strand
Strand 2
B
43 52anti-parallel
Strand 3
B
77 85anti-parallel
Strand 4
B
97 100anti-parallel
Strand 5
B
146 147anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 141first strand
Strand 2
B
43 52anti-parallel
Strand 3
B
344 348anti-parallel
Strand 4
B
321 324parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 105first strand
Strand 2
B
125 126anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il