Analysis of interatomic Contacts of Structural Units in PDB entry:
5FIC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FIC entry

There are 4 chains in PDB entry 5FIC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 84PRO 610
B
 ASN 84PRO 610
C
 ASN 84PRO 610
D
 ASN 84PRO 610
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 88 helices in PDB entry 5FIC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
85 101Right-handed alpha
Helix 2
AA2
A
103 121Right-handed alpha
Helix 3
AA3
A
125 147Right-handed alpha
Helix 4
AA4
A
150 160Right-handed alpha
Helix 5
AA5
A
161 164Right-handed 310
Helix 6
AA6
A
251 261Right-handed alpha
Helix 7
AA7
A
281 285Right-handed 310
Helix 8
AA8
A
286 306Right-handed alpha
Helix 9
AA9
A
336 348Right-handed alpha
Helix 10
AB1
A
352 363Right-handed alpha
Helix 11
AB2
A
379 383Right-handed 310
Helix 12
AB3
A
387 392Right-handed 310
Helix 13
AB4
A
396 398Right-handed 310
Helix 14
AB5
A
399 415Right-handed alpha
Helix 15
AB6
A
425 429Right-handed 310
Helix 16
AB7
A
430 444Right-handed alpha
Helix 17
AB8
A
518 523Right-handed alpha
Helix 18
AB9
A
537 542Right-handed alpha
Helix 19
AC1
A
547 561Right-handed alpha
Helix 20
AC2
A
561 573Right-handed alpha
Helix 21
AC3
A
583 596Right-handed alpha
Helix 22
AC4
A
601 606Right-handed 310
Helix 23
AC5
B
85 102Right-handed alpha
Helix 24
AC6
B
103 121Right-handed alpha
Helix 25
AC7
B
125 146Right-handed alpha
Helix 26
AC8
B
150 160Right-handed alpha
Helix 27
AC9
B
161 164Right-handed 310
Helix 28
AD1
B
251 261Right-handed alpha
Helix 29
AD2
B
281 285Right-handed 310
Helix 30
AD3
B
286 306Right-handed alpha
Helix 31
AD4
B
336 348Right-handed alpha
Helix 32
AD5
B
352 363Right-handed alpha
Helix 33
AD6
B
379 383Right-handed 310
Helix 34
AD7
B
387 392Right-handed 310
Helix 35
AD8
B
396 398Right-handed 310
Helix 36
AD9
B
399 415Right-handed alpha
Helix 37
AE1
B
425 429Right-handed 310
Helix 38
AE2
B
430 444Right-handed alpha
Helix 39
AE3
B
518 523Right-handed alpha
Helix 40
AE4
B
537 542Right-handed alpha
Helix 41
AE5
B
547 561Right-handed alpha
Helix 42
AE6
B
561 573Right-handed alpha
Helix 43
AE7
B
583 596Right-handed alpha
Helix 44
AE8
B
601 606Right-handed 310
Helix 45
AE9
C
85 101Right-handed alpha
Helix 46
AF1
C
103 121Right-handed alpha
Helix 47
AF2
C
125 147Right-handed alpha
Helix 48
AF3
C
150 160Right-handed alpha
Helix 49
AF4
C
161 164Right-handed 310
Helix 50
AF5
C
251 261Right-handed alpha
Helix 51
AF6
C
281 285Right-handed 310
Helix 52
AF7
C
286 306Right-handed alpha
Helix 53
AF8
C
336 348Right-handed alpha
Helix 54
AF9
C
352 363Right-handed alpha
Helix 55
AG1
C
379 383Right-handed 310
Helix 56
AG2
C
387 392Right-handed 310
Helix 57
AG3
C
396 398Right-handed 310
Helix 58
AG4
C
399 415Right-handed alpha
Helix 59
AG5
C
425 429Right-handed 310
Helix 60
AG6
C
430 444Right-handed alpha
Helix 61
AG7
C
518 523Right-handed alpha
Helix 62
AG8
C
537 542Right-handed alpha
Helix 63
AG9
C
547 561Right-handed alpha
Helix 64
AH1
C
561 573Right-handed alpha
Helix 65
AH2
C
583 596Right-handed alpha
Helix 66
AH3
C
601 606Right-handed 310
Helix 67
AH4
D
85 101Right-handed alpha
Helix 68
AH5
D
103 119Right-handed alpha
Helix 69
AH6
D
125 147Right-handed alpha
Helix 70
AH7
D
150 160Right-handed alpha
Helix 71
AH8
D
161 164Right-handed 310
Helix 72
AH9
D
251 261Right-handed alpha
Helix 73
AI1
D
281 285Right-handed 310
Helix 74
AI2
D
286 306Right-handed alpha
Helix 75
AI3
D
336 347Right-handed alpha
Helix 76
AI4
D
352 363Right-handed alpha
Helix 77
AI5
D
379 383Right-handed 310
Helix 78
AI6
D
387 392Right-handed 310
Helix 79
AI7
D
396 398Right-handed 310
Helix 80
AI8
D
399 415Right-handed alpha
Helix 81
AI9
D
425 429Right-handed 310
Helix 82
AJ1
D
430 444Right-handed alpha
Helix 83
AJ2
D
518 523Right-handed alpha
Helix 84
AJ3
D
537 542Right-handed alpha
Helix 85
AJ4
D
547 561Right-handed alpha
Helix 86
AJ5
D
561 573Right-handed alpha
Helix 87
AJ6
D
583 596Right-handed alpha
Helix 88
AJ7
D
601 606Right-handed 310
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There are 8 sheets in PDB entry 5FIC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
310 312first strand
Strand 2
A
270 273parallel
Strand 3
A
196 202parallel
Strand 4
A
492 499anti-parallel
Strand 5
A
509 517anti-parallel
Strand 6
A
531 536anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 367first strand
Strand 2
A
373 378anti-parallel
Strand 3
A
417 422parallel
Strand 4
A
448 453parallel
Strand 5
A
473 479parallel
Strand 6
A
460 465anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
310 312first strand
Strand 2
B
270 273parallel
Strand 3
B
196 202parallel
Strand 4
B
492 499anti-parallel
Strand 5
B
509 517anti-parallel
Strand 6
B
531 536anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
365 370first strand
Strand 2
B
373 377anti-parallel
Strand 3
B
417 421parallel
Strand 4
B
448 453parallel
Strand 5
B
473 479parallel
Strand 6
B
460 465anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
310 312first strand
Strand 2
C
270 273parallel
Strand 3
C
196 202parallel
Strand 4
C
492 499anti-parallel
Strand 5
C
509 517anti-parallel
Strand 6
C
531 536anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
365 367first strand
Strand 2
C
373 377anti-parallel
Strand 3
C
417 421parallel
Strand 4
C
448 453parallel
Strand 5
C
473 479parallel
Strand 6
C
460 465anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
310 312first strand
Strand 2
D
270 273parallel
Strand 3
D
196 202parallel
Strand 4
D
492 499anti-parallel
Strand 5
D
509 517anti-parallel
Strand 6
D
531 536anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
365 367first strand
Strand 2
D
373 377anti-parallel
Strand 3
D
417 421parallel
Strand 4
D
448 453parallel
Strand 5
D
473 479parallel
Strand 6
D
460 465anti-parallel
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