Analysis of interatomic Contacts of Structural Units in PDB entry:
5FJ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FJ6 entry

There is 1 chain in PDB entry 5FJ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1ARG 664
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 5FJ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 18Right-handed alpha
Helix 2
2
A
21 29Right-handed alpha
Helix 3
3
A
47 65Right-handed alpha
Helix 4
4
A
83 87Right-handed 310
Helix 5
5
A
107 111Right-handed 310
Helix 6
6
A
120 135Right-handed alpha
Helix 7
7
A
159 183Right-handed alpha
Helix 8
8
A
185 190Right-handed alpha
Helix 9
9
A
229 235Right-handed alpha
Helix 10
10
A
249 255Right-handed alpha
Helix 11
11
A
279 298Right-handed alpha
Helix 12
12
A
307 316Right-handed alpha
Helix 13
13
A
333 347Right-handed alpha
Helix 14
14
A
350 361Right-handed alpha
Helix 15
15
A
397 418Right-handed alpha
Helix 16
16
A
420 426Right-handed 310
Helix 17
17
A
428 441Right-handed alpha
Helix 18
18
A
464 478Right-handed alpha
Helix 19
19
A
518 527Right-handed alpha
Helix 20
20
A
546 559Right-handed alpha
Helix 21
21
A
563 577Right-handed alpha
Helix 22
22
A
582 602Right-handed alpha
Helix 23
23
A
615 624Right-handed alpha
Helix 24
24
A
625 630Right-handed 310
Helix 25
25
A
633 637Right-handed 310
Helix 26
26
A
638 645Right-handed alpha
Helix 27
27
A
650 662Right-handed alpha
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There are 6 sheets in PDB entry 5FJ6. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 94first strand
Strand 2
A
265 270parallel
Strand 3
A
204 206anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 146first strand
Strand 2
A
646 648anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 201first strand
Strand 2
A
273 274anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 228first strand
Strand 2
A
242 244anti-parallel
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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
319 320first strand
Strand 2
A
454 459anti-parallel
Strand 3
A
447 451anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
366 367first strand
Strand 2
A
377 378anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il