Analysis of interatomic Contacts of Structural Units in PDB entry:
5FJB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FJB entry

There are 3 chains in PDB entry 5FJB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1CYS 218
B
 PRO 1CYS 218
C
 VAL 1GLU 164
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5FJB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 31Right-handed alpha
Helix 2
2
A
35 44Right-handed alpha
Helix 3
3
A
48 59Right-handed alpha
Helix 4
4
A
62 84Right-handed alpha
Helix 5
5
A
100 106Right-handed alpha
Helix 6
6
A
110 120Right-handed alpha
Helix 7
7
A
125 146Right-handed alpha
Helix 8
8
A
160 175Right-handed alpha
Helix 9
9
A
178 188Right-handed alpha
Helix 10
10
A
188 194Right-handed alpha
Helix 11
11
A
195 205Right-handed alpha
Helix 12
12
A
210 216Right-handed alpha
Helix 13
13
B
16 30Right-handed alpha
Helix 14
14
B
35 45Right-handed alpha
Helix 15
15
B
48 59Right-handed alpha
Helix 16
16
B
62 84Right-handed alpha
Helix 17
17
B
100 106Right-handed alpha
Helix 18
18
B
110 120Right-handed alpha
Helix 19
19
B
125 146Right-handed alpha
Helix 20
20
B
149 153Right-handed 310
Helix 21
21
B
160 175Right-handed alpha
Helix 22
22
B
178 186Right-handed alpha
Helix 23
23
B
188 193Right-handed alpha
Helix 24
24
B
195 206Right-handed alpha
Helix 25
25
B
210 217Right-handed alpha
Helix 26
26
C
28 41Right-handed alpha
Helix 27
27
C
118 122Right-handed 310
Helix 28
28
C
134 143Right-handed alpha
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There are 2 sheets in PDB entry 5FJB. Click on sheet of interest to get list of strands forming it: AA, CA,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
11 12anti-parallel
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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
54 56first strand
Strand 2
C
60 63anti-parallel
Strand 3
C
111 114anti-parallel
Strand 4
C
96 99anti-parallel
Strand 5
C
127 133anti-parallel
Strand 6
C
14 23anti-parallel
Strand 7
C
5 11anti-parallel
Strand 8
C
155 162anti-parallel
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