Analysis of interatomic Contacts of Structural Units in PDB entry:
5FJQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FJQ entry

There are 3 chains in PDB entry 5FJQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 37GLY 216
B
 HIS 37GLY 216
C
 HIS 37GLY 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 5FJQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 54Right-handed alpha
Helix 2
2
A
60 70Right-handed alpha
Helix 3
3
A
71 76Right-handed 310
Helix 4
4
A
76 79Right-handed 310
Helix 5
5
A
88 93Right-handed alpha
Helix 6
6
A
103 111Right-handed 310
Helix 7
7
A
157 161Right-handed 310
Helix 8
8
B
45 54Right-handed alpha
Helix 9
9
B
60 70Right-handed alpha
Helix 10
10
B
71 76Right-handed 310
Helix 11
11
B
76 79Right-handed 310
Helix 12
12
B
88 93Right-handed alpha
Helix 13
13
B
103 111Right-handed 310
Helix 14
14
B
157 161Right-handed 310
Helix 15
15
C
45 55Right-handed alpha
Helix 16
16
C
60 70Right-handed alpha
Helix 17
17
C
71 76Right-handed 310
Helix 18
18
C
76 79Right-handed 310
Helix 19
19
C
88 93Right-handed alpha
Helix 20
20
C
103 111Right-handed 310
Helix 21
21
C
157 161Right-handed 310
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There are 15 sheets in PDB entry 5FJQ. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, BD, BE, CA, CB, CC, CD, CE,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 42first strand
Strand 2
A
124 132anti-parallel
Strand 3
A
175 182anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 83first strand
Strand 2
A
205 214anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 120first strand
Strand 2
A
205 214anti-parallel
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There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 166first strand
Strand 2
A
138 145anti-parallel
Strand 3
A
188 197anti-parallel
Strand 4
A
205 214anti-parallel
Strand 5
A
119 120anti-parallel
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There are 5 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 166first strand
Strand 2
A
138 145anti-parallel
Strand 3
A
188 197anti-parallel
Strand 4
A
205 214anti-parallel
Strand 5
A
81 83anti-parallel
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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 42first strand
Strand 2
B
124 131anti-parallel
Strand 3
B
175 182anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
81 83first strand
Strand 2
B
205 214anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 120first strand
Strand 2
B
205 214anti-parallel
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There are 5 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 166first strand
Strand 2
B
138 145anti-parallel
Strand 3
B
188 197anti-parallel
Strand 4
B
205 214anti-parallel
Strand 5
B
119 120anti-parallel
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There are 5 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 166first strand
Strand 2
B
138 145anti-parallel
Strand 3
B
188 197anti-parallel
Strand 4
B
205 214anti-parallel
Strand 5
B
81 83anti-parallel
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There are 3 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
38 42first strand
Strand 2
C
124 132anti-parallel
Strand 3
C
175 182anti-parallel
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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
81 83first strand
Strand 2
C
205 214anti-parallel
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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
119 120first strand
Strand 2
C
205 214anti-parallel
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There are 5 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
162 166first strand
Strand 2
C
138 145anti-parallel
Strand 3
C
188 197anti-parallel
Strand 4
C
205 214anti-parallel
Strand 5
C
119 120anti-parallel
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There are 5 strands in CE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
162 166first strand
Strand 2
C
138 145anti-parallel
Strand 3
C
188 197anti-parallel
Strand 4
C
205 214anti-parallel
Strand 5
C
81 83anti-parallel
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