Analysis of interatomic Contacts of Structural Units in PDB entry:
5FJS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FJS entry

There are 2 chains in PDB entry 5FJS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 35TYR 803
B
 SER 34TYR 803
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 5FJS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
186 190Right-handed 310
Helix 2
2
A
289 294Right-handed alpha
Helix 3
3
A
357 362Right-handed alpha
Helix 4
4
A
367 395Right-handed alpha
Helix 5
5
A
400 410Right-handed alpha
Helix 6
6
A
411 417Right-handed alpha
Helix 7
7
A
450 458Right-handed alpha
Helix 8
8
A
458 465Right-handed alpha
Helix 9
9
A
465 478Right-handed alpha
Helix 10
10
A
527 531Right-handed 310
Helix 11
11
A
533 548Right-handed alpha
Helix 12
12
A
553 573Right-handed alpha
Helix 13
13
A
601 622Right-handed alpha
Helix 14
14
A
624 647Right-handed alpha
Helix 15
15
A
669 678Right-handed alpha
Helix 16
16
A
685 699Right-handed alpha
Helix 17
17
A
704 708Right-handed 310
Helix 18
18
A
725 730Right-handed 310
Helix 19
19
A
733 746Right-handed alpha
Helix 20
20
A
748 765Right-handed alpha
Helix 21
21
A
791 801Right-handed 310
Helix 22
22
B
186 190Right-handed 310
Helix 23
23
B
357 362Right-handed alpha
Helix 24
24
B
367 395Right-handed alpha
Helix 25
25
B
400 410Right-handed alpha
Helix 26
26
B
411 417Right-handed alpha
Helix 27
27
B
450 458Right-handed alpha
Helix 28
28
B
458 465Right-handed alpha
Helix 29
29
B
465 480Right-handed alpha
Helix 30
30
B
527 531Right-handed 310
Helix 31
31
B
533 548Right-handed alpha
Helix 32
32
B
553 573Right-handed alpha
Helix 33
33
B
601 622Right-handed alpha
Helix 34
34
B
624 647Right-handed alpha
Helix 35
35
B
669 678Right-handed alpha
Helix 36
36
B
685 699Right-handed alpha
Helix 37
37
B
704 708Right-handed 310
Helix 38
38
B
726 730Right-handed 310
Helix 39
39
B
733 746Right-handed alpha
Helix 40
40
B
748 765Right-handed alpha
Helix 41
41
B
791 801Right-handed 310
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There are 18 sheets in PDB entry 5FJS. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, BA, BB, BC, BD, BE, BF, BG, BH,

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 47first strand
Strand 2
A
150 155anti-parallel
Strand 3
A
158 163anti-parallel
Strand 4
A
171 177anti-parallel
Strand 5
A
192 196anti-parallel
Strand 6
A
335 341anti-parallel
Strand 7
A
264 270anti-parallel
Strand 8
A
246 252anti-parallel
Strand 9
A
233 239anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 47first strand
Strand 2
A
150 155anti-parallel
Strand 3
A
158 163anti-parallel
Strand 4
A
171 177anti-parallel
Strand 5
A
199 200anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 75first strand
Strand 2
A
82 85anti-parallel
Strand 3
A
91 95anti-parallel
Strand 4
A
102 103anti-parallel
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There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 127first strand
Strand 2
A
110 114anti-parallel
Strand 3
A
210 216anti-parallel
Strand 4
A
316 320anti-parallel
Strand 5
A
279 284anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 276first strand
Strand 2
A
323 324anti-parallel
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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 346first strand
Strand 2
A
352 355anti-parallel
Strand 3
A
420 425anti-parallel
Strand 4
A
437 438anti-parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
484 489first strand
Strand 2
A
496 500anti-parallel
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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
584 585first strand
Strand 2
A
598 599anti-parallel
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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
664 665first strand
Strand 2
A
714 715anti-parallel
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There are 3 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
731 732first strand
Strand 2
A
778 779anti-parallel
Strand 3
A
785 786anti-parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 47first strand
Strand 2
B
150 155anti-parallel
Strand 3
B
158 163anti-parallel
Strand 4
B
171 177anti-parallel
Strand 5
B
192 200anti-parallel
Strand 6
B
335 341anti-parallel
Strand 7
B
264 269anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 75first strand
Strand 2
B
83 85anti-parallel
Strand 3
B
91 94anti-parallel
Strand 4
B
102 103anti-parallel
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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 112first strand
Strand 2
B
212 216anti-parallel
Strand 3
B
317 320anti-parallel
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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
344 346first strand
Strand 2
B
352 355anti-parallel
Strand 3
B
420 425anti-parallel
Strand 4
B
437 438anti-parallel
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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
484 489first strand
Strand 2
B
496 500anti-parallel
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There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
584 587first strand
Strand 2
B
597 599anti-parallel
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There are 2 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
664 665first strand
Strand 2
B
714 715anti-parallel
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There are 3 strands in BH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
731 732first strand
Strand 2
B
778 779anti-parallel
Strand 3
B
785 786anti-parallel
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