Analysis of interatomic Contacts of Structural Units in PDB entry:
5FJY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FJY entry

There are 6 chains in PDB entry 5FJY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 195ARG 479
B
 PRO 195ARG 479
C
 PRO 195ARG 479
D
 UNK 1001UNK 1005
E
 UNK 1001UNK 1005
F
 UNK 1001UNK 1002
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 5FJY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
196 212Right-handed alpha
Helix 2
2
A
216 232Right-handed alpha
Helix 3
3
A
236 253Right-handed alpha
Helix 4
4
A
255 274Right-handed alpha
Helix 5
5
A
278 295Right-handed alpha
Helix 6
6
A
300 317Right-handed alpha
Helix 7
7
A
320 337Right-handed alpha
Helix 8
8
A
339 358Right-handed alpha
Helix 9
9
A
362 379Right-handed alpha
Helix 10
10
A
381 398Right-handed alpha
Helix 11
11
A
410 419Right-handed alpha
Helix 12
12
A
445 462Right-handed alpha
Helix 13
13
A
464 478Right-handed alpha
Helix 14
14
B
196 212Right-handed alpha
Helix 15
15
B
216 232Right-handed alpha
Helix 16
16
B
236 253Right-handed alpha
Helix 17
17
B
255 274Right-handed alpha
Helix 18
18
B
278 295Right-handed alpha
Helix 19
19
B
300 317Right-handed alpha
Helix 20
20
B
320 331Right-handed alpha
Helix 21
21
B
340 358Right-handed alpha
Helix 22
22
B
362 379Right-handed alpha
Helix 23
23
B
381 398Right-handed alpha
Helix 24
24
B
410 419Right-handed alpha
Helix 25
25
B
445 456Right-handed alpha
Helix 26
26
B
457 462Right-handed alpha
Helix 27
27
B
464 471Right-handed alpha
Helix 28
28
C
196 212Right-handed alpha
Helix 29
29
C
216 232Right-handed alpha
Helix 30
30
C
236 253Right-handed alpha
Helix 31
31
C
255 274Right-handed alpha
Helix 32
32
C
278 295Right-handed alpha
Helix 33
33
C
300 317Right-handed alpha
Helix 34
34
C
320 336Right-handed alpha
Helix 35
35
C
339 358Right-handed alpha
Helix 36
36
C
362 380Right-handed alpha
Helix 37
37
C
381 398Right-handed alpha
Helix 38
38
C
410 419Right-handed alpha
Helix 39
39
C
445 462Right-handed alpha
Helix 40
40
C
464 478Right-handed alpha
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There are no sheets in PDB entry 5FJY
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il