Analysis of interatomic Contacts of Structural Units in PDB entry:
5FL7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5FL7 entry

There are 19 chains in PDB entry 5FL7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 49	SER 533
B	ALA 49	SER 533
C	ALA 49	SER 533
D	GLY 37	ALA 506
E	GLY 39	ALA 506
F	GLY 37	ALA 506
G	THR 23	LEU 292
H	LEU 15	ALA 133
I	UNK 8	UNK 23
K	GLN 2	TYR 74
L	GLN 2	LEU 73
M	GLN 2	VAL 76
N	MET 1	ALA 75
O	GLN 2	VAL 76
P	MET 1	ALA 75
Q	MET 1	VAL 76
R	GLN 2	ALA 75
S	GLN 2	ALA 75
T	GLN 2	ALA 75

There are166 helices in PDB entry 5FL7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	126	130	Right-handed 310
Helix 2	2	A	176	183	Right-handed alpha
Helix 3	3	A	200	212	Right-handed alpha
Helix 4	4	A	213	215	Right-handed 310
Helix 5	5	A	235	248	Right-handed alpha
Helix 6	6	A	265	286	Right-handed alpha
Helix 7	7	A	297	311	Right-handed alpha
Helix 8	8	A	316	320	Right-handed 310
Helix 9	9	A	324	333	Right-handed alpha
Helix 10	10	A	339	343	Right-handed 310
Helix 11	11	A	362	370	Right-handed alpha
Helix 12	12	A	379	386	Right-handed alpha
Helix 13	13	A	406	410	Right-handed 310
Helix 14	14	A	413	420	Right-handed alpha
Helix 15	15	A	423	429	Right-handed alpha
Helix 16	16	A	437	454	Right-handed alpha
Helix 17	17	A	463	477	Right-handed alpha
Helix 18	18	A	486	493	Right-handed alpha
Helix 19	19	A	494	502	Right-handed alpha
Helix 20	20	A	502	510	Right-handed alpha
Helix 21	21	A	516	528	Right-handed alpha
Helix 22	22	B	104	108	Right-handed 310
Helix 23	23	B	126	130	Right-handed 310
Helix 24	24	B	176	181	Right-handed alpha
Helix 25	25	B	200	212	Right-handed alpha
Helix 26	26	B	213	215	Right-handed 310
Helix 27	27	B	235	248	Right-handed alpha
Helix 28	28	B	251	253	Right-handed 310
Helix 29	29	B	265	286	Right-handed alpha
Helix 30	30	B	296	311	Right-handed alpha
Helix 31	31	B	316	320	Right-handed 310
Helix 32	32	B	323	333	Right-handed alpha
Helix 33	33	B	339	343	Right-handed 310
Helix 34	34	B	362	370	Right-handed alpha
Helix 35	35	B	380	386	Right-handed alpha
Helix 36	36	B	406	411	Right-handed alpha
Helix 37	37	B	416	428	Right-handed alpha
Helix 38	38	B	437	454	Right-handed alpha
Helix 39	39	B	463	476	Right-handed alpha
Helix 40	40	B	483	499	Right-handed alpha
Helix 41	41	B	502	512	Right-handed alpha
Helix 42	42	B	516	528	Right-handed alpha
Helix 43	43	B	529	532	Right-handed 310
Helix 44	44	C	126	130	Right-handed 310
Helix 45	45	C	176	181	Right-handed alpha
Helix 46	46	C	200	212	Right-handed alpha
Helix 47	47	C	235	248	Right-handed alpha
Helix 48	48	C	265	286	Right-handed alpha
Helix 49	49	C	299	311	Right-handed alpha
Helix 50	50	C	316	320	Right-handed 310
Helix 51	51	C	323	333	Right-handed alpha
Helix 52	52	C	362	370	Right-handed alpha
Helix 53	53	C	379	385	Right-handed alpha
Helix 54	54	C	406	414	Right-handed alpha
Helix 55	55	C	415	428	Right-handed alpha
Helix 56	56	C	441	454	Right-handed alpha
Helix 57	57	C	463	476	Right-handed alpha
Helix 58	58	C	486	495	Right-handed alpha
Helix 59	59	C	495	502	Right-handed alpha
Helix 60	60	C	503	505	Right-handed 310
Helix 61	61	C	506	512	Right-handed alpha
Helix 62	62	C	516	528	Right-handed alpha
Helix 63	63	C	529	531	Right-handed 310
Helix 64	64	D	119	123	Right-handed 310
Helix 65	65	D	154	157	Right-handed 310
Helix 66	66	D	194	209	Right-handed alpha
Helix 67	67	D	221	236	Right-handed alpha
Helix 68	68	D	256	261	Right-handed alpha
Helix 69	69	D	262	277	Right-handed alpha
Helix 70	70	D	288	301	Right-handed alpha
Helix 71	71	D	308	312	Right-handed 310
Helix 72	72	D	316	325	Right-handed alpha
Helix 73	73	D	343	347	Right-handed 310
Helix 74	74	D	350	357	Right-handed alpha
Helix 75	75	D	367	373	Right-handed alpha
Helix 76	76	D	395	415	Right-handed alpha
Helix 77	77	D	415	422	Right-handed alpha
Helix 78	78	D	428	446	Right-handed alpha
Helix 79	79	D	452	457	Right-handed alpha
Helix 80	80	D	465	477	Right-handed alpha
Helix 81	81	D	484	488	Right-handed 310
Helix 82	82	D	496	506	Right-handed alpha
Helix 83	83	E	119	122	Right-handed 310
Helix 84	84	E	154	158	Right-handed 310
Helix 85	85	E	194	209	Right-handed alpha
Helix 86	86	E	221	233	Right-handed alpha
Helix 87	87	E	256	261	Right-handed alpha
Helix 88	88	E	262	277	Right-handed alpha
Helix 89	89	E	289	304	Right-handed alpha
Helix 90	90	E	308	312	Right-handed 310
Helix 91	91	E	315	325	Right-handed alpha
Helix 92	92	E	343	347	Right-handed 310
Helix 93	93	E	350	358	Right-handed alpha
Helix 94	94	E	367	373	Right-handed alpha
Helix 95	95	E	394	420	Right-handed alpha
Helix 96	96	E	428	444	Right-handed alpha
Helix 97	97	E	449	453	Right-handed 310
Helix 98	98	E	465	477	Right-handed alpha
Helix 99	99	E	484	488	Right-handed 310
Helix 100	100	E	496	505	Right-handed alpha
Helix 101	101	F	119	123	Right-handed 310
Helix 102	102	F	193	209	Right-handed alpha
Helix 103	103	F	222	236	Right-handed alpha
Helix 104	104	F	256	261	Right-handed alpha
Helix 105	105	F	262	277	Right-handed alpha
Helix 106	106	F	289	301	Right-handed alpha
Helix 107	107	F	308	312	Right-handed 310
Helix 108	108	F	316	325	Right-handed alpha
Helix 109	109	F	343	347	Right-handed 310
Helix 110	110	F	350	355	Right-handed alpha
Helix 111	111	F	356	360	Right-handed 310
Helix 112	112	F	367	373	Right-handed alpha
Helix 113	113	F	394	415	Right-handed alpha
Helix 114	114	F	415	422	Right-handed alpha
Helix 115	115	F	432	445	Right-handed alpha
Helix 116	116	F	449	454	Right-handed 310
Helix 117	117	F	464	477	Right-handed alpha
Helix 118	118	F	484	488	Right-handed 310
Helix 119	119	F	493	506	Right-handed alpha
Helix 120	120	G	24	43	Right-handed alpha
Helix 121	121	G	45	64	Right-handed alpha
Helix 122	122	G	66	70	Right-handed 310
Helix 123	123	G	72	76	Right-handed 310
Helix 124	124	G	101	116	Right-handed alpha
Helix 125	125	G	130	138	Right-handed alpha
Helix 126	126	G	159	173	Right-handed alpha
Helix 127	127	G	201	207	Right-handed alpha
Helix 128	128	G	222	290	Right-handed alpha
Helix 129	129	H	60	62	Right-handed 310
Helix 130	130	H	101	113	Right-handed alpha
Helix 131	131	H	119	128	Right-handed alpha
Helix 132	132	I	9	17	Right-handed alpha
Helix 133	133	K	2	16	Right-handed alpha
Helix 134	134	K	18	38	Right-handed alpha
Helix 135	135	K	40	42	Right-handed 310
Helix 136	136	K	43	74	Right-handed alpha
Helix 137	137	L	2	16	Right-handed alpha
Helix 138	138	L	19	40	Right-handed alpha
Helix 139	139	L	43	73	Right-handed alpha
Helix 140	140	M	2	16	Right-handed alpha
Helix 141	141	M	19	40	Right-handed alpha
Helix 142	142	M	43	74	Right-handed alpha
Helix 143	143	N	1	16	Right-handed alpha
Helix 144	144	N	19	40	Right-handed alpha
Helix 145	145	N	44	72	Right-handed alpha
Helix 146	146	O	2	16	Right-handed alpha
Helix 147	147	O	19	40	Right-handed alpha
Helix 148	148	O	43	73	Right-handed alpha
Helix 149	149	P	1	16	Right-handed alpha
Helix 150	150	P	19	40	Right-handed alpha
Helix 151	151	P	43	74	Right-handed alpha
Helix 152	152	Q	1	15	Right-handed alpha
Helix 153	153	Q	18	38	Right-handed alpha
Helix 154	154	Q	40	42	Right-handed 310
Helix 155	155	Q	43	75	Right-handed alpha
Helix 156	156	R	2	16	Right-handed alpha
Helix 157	157	R	19	38	Right-handed alpha
Helix 158	158	R	40	42	Right-handed 310
Helix 159	159	R	43	75	Right-handed alpha
Helix 160	160	S	2	16	Right-handed alpha
Helix 161	161	S	19	38	Right-handed alpha
Helix 162	162	S	40	42	Right-handed 310
Helix 163	163	S	43	75	Right-handed alpha
Helix 164	164	T	2	16	Right-handed alpha
Helix 165	165	T	19	40	Right-handed alpha
Helix 166	166	T	43	72	Right-handed alpha

There are 23 sheets in PDB entry 5FL7. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, CA, CB, CC, CD, A, DB, C, DD, EA, EB, FA, FB, FC, GA, GB, HA, HB,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	61	first strand
Strand 2	A	113	120	anti-parallel
Strand 3	A	77	80	anti-parallel
Strand 4	A	86	92	anti-parallel
Strand 5	A	97	101	anti-parallel
Strand 6	A	64	69	anti-parallel
Strand 7	A	54	61	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	122	125	first strand
Strand 2	A	151	154	anti-parallel

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There are 8 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	133	134	first strand
Strand 2	A	256	260	parallel
Strand 3	A	226	232	parallel
Strand 4	A	289	295	parallel
Strand 5	A	346	354	parallel
Strand 6	A	192	195	parallel
Strand 7	A	374	378	parallel
Strand 8	A	397	398	anti-parallel

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There are 11 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	61	first strand
Strand 2	B	113	115	parallel
Strand 3	B	78	81	anti-parallel
Strand 4	B	86	92	anti-parallel
Strand 5	F	41	47	anti-parallel
Strand 6	F	50	54	parallel
Strand 7	F	89	94	parallel
Strand 8	F	76	86	anti-parallel
Strand 9	F	66	70	anti-parallel
Strand 10	F	106	109	anti-parallel
Strand 11	B	54	61	first strand

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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	122	125	first strand
Strand 2	B	151	154	anti-parallel

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There are 8 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	133	134	first strand
Strand 2	B	255	261	parallel
Strand 3	B	226	234	parallel
Strand 4	B	289	295	parallel
Strand 5	B	346	354	parallel
Strand 6	B	192	195	parallel
Strand 7	B	374	378	parallel
Strand 8	B	397	398	anti-parallel

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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	55	61	first strand
Strand 2	C	64	69	anti-parallel
Strand 3	C	97	100	anti-parallel
Strand 4	C	86	92	anti-parallel
Strand 5	C	77	81	anti-parallel
Strand 6	C	114	120	anti-parallel

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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	122	125	first strand
Strand 2	C	151	154	anti-parallel

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There are 6 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	133	134	first strand
Strand 2	C	255	260	parallel
Strand 3	C	226	232	parallel
Strand 4	C	289	295	parallel
Strand 5	C	346	354	parallel
Strand 6	C	193	195	parallel

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There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	374	375	first strand
Strand 2	C	397	398	anti-parallel

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There are 7 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	40	47	first strand
Strand 2	D	106	109	anti-parallel
Strand 3	D	66	69	anti-parallel
Strand 4	D	77	86	anti-parallel
Strand 5	D	89	94	anti-parallel
Strand 6	D	50	54	anti-parallel
Strand 7	D	40	47	anti-parallel

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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	115	117	first strand
Strand 2	D	145	147	anti-parallel

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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	126	127	first strand
Strand 2	D	246	251	parallel
Strand 3	D	213	218	parallel
Strand 4	D	281	286	parallel
Strand 5	D	334	340	parallel
Strand 6	D	183	186	parallel
Strand 7	D	362	364	parallel

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There are 2 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	164	165	first strand
Strand 2	D	178	179	anti-parallel

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There are 7 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	41	47	first strand
Strand 2	E	106	109	anti-parallel
Strand 3	E	66	69	anti-parallel
Strand 4	E	77	86	anti-parallel
Strand 5	E	89	94	anti-parallel
Strand 6	E	50	54	anti-parallel
Strand 7	E	41	47	anti-parallel

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There are 7 strands in EB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	126	127	first strand
Strand 2	E	246	252	parallel
Strand 3	E	213	220	parallel
Strand 4	E	281	287	parallel
Strand 5	E	334	340	parallel
Strand 6	E	183	186	parallel
Strand 7	E	362	364	parallel

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There are 2 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	115	118	first strand
Strand 2	F	144	147	anti-parallel

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There are 7 strands in FB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	126	127	first strand
Strand 2	F	246	251	parallel
Strand 3	F	213	218	parallel
Strand 4	F	282	287	parallel
Strand 5	F	335	340	parallel
Strand 6	F	183	186	parallel
Strand 7	F	362	364	parallel

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There are 2 strands in FC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	163	164	first strand
Strand 2	F	179	180	anti-parallel

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There are 5 strands in GA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	148	149	first strand
Strand 2	G	125	129	parallel
Strand 3	G	87	91	parallel
Strand 4	G	178	182	parallel
Strand 5	G	197	199	anti-parallel

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There are 2 strands in GB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	184	186	first strand
Strand 2	G	192	194	anti-parallel

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There are 4 strands in HA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	35	39	first strand
Strand 2	H	27	32	anti-parallel
Strand 3	H	53	58	anti-parallel
Strand 4	H	64	69	anti-parallel

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There are 2 strands in HB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	76	77	first strand
Strand 2	H	81	82	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5FL7

Analysis of interatomic Contacts of Structural Units in PDB entry:
5FL7