Analysis of interatomic Contacts of Structural Units in PDB entry:
5FLH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FLH entry

There are 2 chains in PDB entry 5FLH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 3LEU 192
B
 ILE 3GLY 185
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 6 helices in PDB entry 5FLH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 49Right-handed 310
Helix 2
2
A
139 145Right-handed alpha
Helix 3
3
A
163 172Right-handed alpha
Helix 4
4
B
45 49Right-handed 310
Helix 5
5
B
139 145Right-handed alpha
Helix 6
6
B
161 172Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 5FLH. Click on sheet of interest to get list of strands forming it: AA, AB, BA, AC, AD, AE, AF, BB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 25first strand
Strand 2
B
106 109anti-parallel
Strand 3
B
75 82anti-parallel
Strand 4
B
124 132anti-parallel
Strand 5
B
135 136parallel
Back to list of sheets
Back to top of page

There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 25first strand
Strand 2
B
106 109anti-parallel
Strand 3
B
75 82anti-parallel
Strand 4
B
124 132anti-parallel
Strand 5
B
55 60anti-parallel
Strand 6
B
38 44anti-parallel
Strand 7
B
31 35anti-parallel
Strand 8
B
146 148anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 136first strand
Strand 2
B
124 132parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 136first strand
Strand 2
A
124 132parallel
Back to list of sheets
Back to top of page

There are 6 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 148first strand
Strand 2
A
31 35anti-parallel
Strand 3
A
38 44anti-parallel
Strand 4
A
55 60anti-parallel
Strand 5
A
124 132anti-parallel
Strand 6
A
135 136parallel
Back to list of sheets
Back to top of page

There are 8 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 148first strand
Strand 2
A
31 35anti-parallel
Strand 3
A
38 44anti-parallel
Strand 4
A
55 60anti-parallel
Strand 5
A
124 132anti-parallel
Strand 6
A
75 82anti-parallel
Strand 7
A
106 109anti-parallel
Strand 8
B
23 25anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 101first strand
Strand 2
A
85 90anti-parallel
Strand 3
A
114 119anti-parallel
Strand 4
A
65 70anti-parallel
Strand 5
A
175 176anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
96 101first strand
Strand 2
B
85 90anti-parallel
Strand 3
B
115 119anti-parallel
Strand 4
B
65 70anti-parallel
Strand 5
B
175 176anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il