Analysis of interatomic Contacts of Structural Units in PDB entry:
5FLJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5FLJ entry

There are 7 chains in PDB entry 5FLJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 3	THR 184
B	ILE 3	GLY 185
C	ILE 3	GLY 185
D	ILE 3	GLY 185
E	ILE 3	GLY 185
F	ILE 3	GLY 185
G	ILE 3	GLY 132

There are 46 helices in PDB entry 5FLJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	45	49	Right-handed 310
Helix 2	2	A	139	145	Right-handed alpha
Helix 3	3	A	161	168	Right-handed alpha
Helix 4	4	A	169	171	Right-handed 310
Helix 5	5	B	45	49	Right-handed 310
Helix 6	6	B	139	145	Right-handed alpha
Helix 7	7	B	161	168	Right-handed alpha
Helix 8	8	B	169	171	Right-handed 310
Helix 9	9	C	45	49	Right-handed 310
Helix 10	10	C	139	145	Right-handed alpha
Helix 11	11	C	161	168	Right-handed alpha
Helix 12	12	C	169	171	Right-handed 310
Helix 13	13	D	45	49	Right-handed 310
Helix 14	14	D	139	145	Right-handed alpha
Helix 15	15	D	161	168	Right-handed alpha
Helix 16	16	D	169	171	Right-handed 310
Helix 17	17	E	45	49	Right-handed 310
Helix 18	18	E	139	145	Right-handed alpha
Helix 19	19	E	163	172	Right-handed alpha
Helix 20	20	F	45	49	Right-handed 310
Helix 21	21	F	139	145	Right-handed alpha
Helix 22	22	F	161	168	Right-handed alpha
Helix 23	23	F	169	171	Right-handed 310
Helix 24	24	G	45	49	Right-handed 310
Helix 25	25	G	139	145	Right-handed alpha
Helix 26	26	G	161	168	Right-handed alpha
Helix 27	27	G	169	171	Right-handed 310
Helix 28	28	H	45	49	Right-handed 310
Helix 29	29	H	139	145	Right-handed alpha
Helix 30	30	H	161	168	Right-handed alpha
Helix 31	31	H	169	171	Right-handed 310
Helix 32	32	I	45	49	Right-handed 310
Helix 33	33	I	139	145	Right-handed alpha
Helix 34	34	I	161	168	Right-handed alpha
Helix 35	35	I	169	171	Right-handed 310
Helix 36	36	J	45	49	Right-handed 310
Helix 37	37	J	139	145	Right-handed alpha
Helix 38	38	J	163	168	Right-handed alpha
Helix 39	39	J	169	171	Right-handed 310
Helix 40	40	K	45	49	Right-handed 310
Helix 41	41	K	139	145	Right-handed alpha
Helix 42	42	K	161	172	Right-handed alpha
Helix 43	43	L	45	49	Right-handed 310
Helix 44	44	L	139	145	Right-handed alpha
Helix 45	45	L	161	168	Right-handed alpha
Helix 46	46	L	169	171	Right-handed 310

There are 60 sheets in PDB entry 5FLJ. Click on sheet of interest to get list of strands forming it: AA, AB, BA, AC, AD, AE, AF, AG, BB, BC, CA, CB, A, CC, CD, CE, CF, CG, DB, C, EA, EB, FA, EC, ED, EE, EF, EG, FB, FC, GA, GB, HA, GC, GD, GE, GF, GG, HB, HC, IA, IB, JA, IC, ID, IE, IF, IG, JB, JC, KA, KB, LA, KC, KD, KE, KF, KG, LB, LC,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	23	25	first strand
Strand 2	B	106	109	anti-parallel
Strand 3	B	75	82	anti-parallel
Strand 4	B	124	132	anti-parallel
Strand 5	B	135	136	parallel

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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	23	25	first strand
Strand 2	B	106	109	anti-parallel
Strand 3	B	75	82	anti-parallel
Strand 4	B	124	132	anti-parallel
Strand 5	B	55	60	anti-parallel
Strand 6	B	38	44	anti-parallel
Strand 7	B	31	35	anti-parallel
Strand 8	B	146	148	anti-parallel

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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	135	136	first strand
Strand 2	B	124	132	parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	135	136	first strand
Strand 2	A	124	132	parallel

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There are 6 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	146	148	first strand
Strand 2	A	31	35	anti-parallel
Strand 3	A	38	44	anti-parallel
Strand 4	A	55	60	anti-parallel
Strand 5	A	124	132	anti-parallel
Strand 6	A	135	136	parallel

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There are 8 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	146	148	first strand
Strand 2	A	31	35	anti-parallel
Strand 3	A	38	44	anti-parallel
Strand 4	A	55	60	anti-parallel
Strand 5	A	124	132	anti-parallel
Strand 6	A	75	82	anti-parallel
Strand 7	A	106	109	anti-parallel
Strand 8	B	23	25	anti-parallel

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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	69	70	first strand
Strand 2	A	175	176	anti-parallel

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There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	96	101	first strand
Strand 2	A	85	90	anti-parallel
Strand 3	A	115	119	anti-parallel

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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	69	70	first strand
Strand 2	B	175	176	anti-parallel

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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	101	first strand
Strand 2	B	85	90	anti-parallel
Strand 3	B	115	119	anti-parallel

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There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	23	25	first strand
Strand 2	D	106	109	anti-parallel
Strand 3	D	75	82	anti-parallel
Strand 4	D	124	132	anti-parallel
Strand 5	D	135	136	parallel

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There are 8 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	23	25	first strand
Strand 2	D	106	109	anti-parallel
Strand 3	D	75	82	anti-parallel
Strand 4	D	124	132	anti-parallel
Strand 5	D	55	60	anti-parallel
Strand 6	D	38	44	anti-parallel
Strand 7	D	31	35	anti-parallel
Strand 8	D	146	148	anti-parallel

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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	135	136	first strand
Strand 2	D	124	132	parallel

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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	135	136	first strand
Strand 2	C	124	132	parallel

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There are 6 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	146	148	first strand
Strand 2	C	31	35	anti-parallel
Strand 3	C	38	44	anti-parallel
Strand 4	C	55	60	anti-parallel
Strand 5	C	124	132	anti-parallel
Strand 6	C	135	136	parallel

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There are 8 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	146	148	first strand
Strand 2	C	31	35	anti-parallel
Strand 3	C	38	44	anti-parallel
Strand 4	C	55	60	anti-parallel
Strand 5	C	124	132	anti-parallel
Strand 6	C	75	82	anti-parallel
Strand 7	C	106	109	anti-parallel
Strand 8	D	23	25	anti-parallel

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There are 2 strands in CF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	69	70	first strand
Strand 2	C	175	176	anti-parallel

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There are 3 strands in CG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	96	101	first strand
Strand 2	C	85	90	anti-parallel
Strand 3	C	115	119	anti-parallel

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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	69	70	first strand
Strand 2	D	175	176	anti-parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	96	101	first strand
Strand 2	D	85	90	anti-parallel
Strand 3	D	115	119	anti-parallel

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There are 5 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	23	25	first strand
Strand 2	F	106	109	anti-parallel
Strand 3	F	75	82	anti-parallel
Strand 4	F	124	132	anti-parallel
Strand 5	F	135	136	parallel

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There are 8 strands in EB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	23	25	first strand
Strand 2	F	106	109	anti-parallel
Strand 3	F	75	82	anti-parallel
Strand 4	F	124	132	anti-parallel
Strand 5	F	55	60	anti-parallel
Strand 6	F	38	44	anti-parallel
Strand 7	F	31	35	anti-parallel
Strand 8	F	146	148	anti-parallel

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There are 2 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	135	136	first strand
Strand 2	F	124	132	parallel

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There are 2 strands in EC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	135	136	first strand
Strand 2	E	124	132	parallel

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There are 6 strands in ED sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	146	148	first strand
Strand 2	E	31	35	anti-parallel
Strand 3	E	38	44	anti-parallel
Strand 4	E	55	60	anti-parallel
Strand 5	E	124	132	anti-parallel
Strand 6	E	135	136	parallel

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There are 8 strands in EE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	146	148	first strand
Strand 2	E	31	35	anti-parallel
Strand 3	E	38	44	anti-parallel
Strand 4	E	55	60	anti-parallel
Strand 5	E	124	132	anti-parallel
Strand 6	E	75	82	anti-parallel
Strand 7	E	106	109	anti-parallel
Strand 8	F	23	25	anti-parallel

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There are 2 strands in EF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	69	70	first strand
Strand 2	E	175	176	anti-parallel

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There are 3 strands in EG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	96	101	first strand
Strand 2	E	85	90	anti-parallel
Strand 3	E	115	119	anti-parallel

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There are 2 strands in FB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	69	70	first strand
Strand 2	F	175	176	anti-parallel

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There are 3 strands in FC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	96	101	first strand
Strand 2	F	85	90	anti-parallel
Strand 3	F	115	119	anti-parallel

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There are 5 strands in GA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	23	25	first strand
Strand 2	H	106	109	anti-parallel
Strand 3	H	75	82	anti-parallel
Strand 4	H	124	132	anti-parallel
Strand 5	H	135	136	parallel

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There are 8 strands in GB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	23	25	first strand
Strand 2	H	106	109	anti-parallel
Strand 3	H	75	82	anti-parallel
Strand 4	H	124	132	anti-parallel
Strand 5	H	55	60	anti-parallel
Strand 6	H	38	44	anti-parallel
Strand 7	H	31	35	anti-parallel
Strand 8	H	146	148	anti-parallel

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There are 2 strands in HA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	135	136	first strand
Strand 2	H	124	132	parallel

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There are 2 strands in GC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	135	136	first strand
Strand 2	G	124	132	parallel

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There are 6 strands in GD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	146	148	first strand
Strand 2	G	31	35	anti-parallel
Strand 3	G	38	44	anti-parallel
Strand 4	G	55	60	anti-parallel
Strand 5	G	124	132	anti-parallel
Strand 6	G	135	136	parallel

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There are 8 strands in GE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	146	148	first strand
Strand 2	G	31	35	anti-parallel
Strand 3	G	38	44	anti-parallel
Strand 4	G	55	60	anti-parallel
Strand 5	G	124	132	anti-parallel
Strand 6	G	75	82	anti-parallel
Strand 7	G	106	109	anti-parallel
Strand 8	H	23	25	anti-parallel

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There are 2 strands in GF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	69	70	first strand
Strand 2	G	175	176	anti-parallel

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There are 3 strands in GG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	96	101	first strand
Strand 2	G	85	90	anti-parallel
Strand 3	G	115	119	anti-parallel

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There are 2 strands in HB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	69	70	first strand
Strand 2	H	175	176	anti-parallel

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There are 3 strands in HC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	96	101	first strand
Strand 2	H	85	90	anti-parallel
Strand 3	H	115	119	anti-parallel

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There are 5 strands in IA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	23	25	first strand
Strand 2	J	106	109	anti-parallel
Strand 3	J	75	82	anti-parallel
Strand 4	J	124	132	anti-parallel
Strand 5	J	135	136	parallel

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There are 8 strands in IB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	23	25	first strand
Strand 2	J	106	109	anti-parallel
Strand 3	J	75	82	anti-parallel
Strand 4	J	124	132	anti-parallel
Strand 5	J	55	60	anti-parallel
Strand 6	J	38	44	anti-parallel
Strand 7	J	31	35	anti-parallel
Strand 8	J	146	148	anti-parallel

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There are 2 strands in JA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	135	136	first strand
Strand 2	J	124	132	parallel

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There are 2 strands in IC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	135	136	first strand
Strand 2	I	124	132	parallel

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There are 6 strands in ID sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	146	148	first strand
Strand 2	I	31	35	anti-parallel
Strand 3	I	38	44	anti-parallel
Strand 4	I	55	60	anti-parallel
Strand 5	I	124	132	anti-parallel
Strand 6	I	135	136	parallel

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There are 8 strands in IE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	146	148	first strand
Strand 2	I	31	35	anti-parallel
Strand 3	I	38	44	anti-parallel
Strand 4	I	55	60	anti-parallel
Strand 5	I	124	132	anti-parallel
Strand 6	I	75	82	anti-parallel
Strand 7	I	106	109	anti-parallel
Strand 8	J	23	25	anti-parallel

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There are 2 strands in IF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	69	70	first strand
Strand 2	I	175	176	anti-parallel

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There are 3 strands in IG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	96	101	first strand
Strand 2	I	85	90	anti-parallel
Strand 3	I	115	119	anti-parallel

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There are 2 strands in JB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	69	70	first strand
Strand 2	J	175	176	anti-parallel

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There are 3 strands in JC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	96	101	first strand
Strand 2	J	85	90	anti-parallel
Strand 3	J	115	119	anti-parallel

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There are 5 strands in KA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	23	25	first strand
Strand 2	L	106	109	anti-parallel
Strand 3	L	75	82	anti-parallel
Strand 4	L	124	132	anti-parallel
Strand 5	L	135	136	parallel

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There are 8 strands in KB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	23	25	first strand
Strand 2	L	106	109	anti-parallel
Strand 3	L	75	82	anti-parallel
Strand 4	L	124	132	anti-parallel
Strand 5	L	55	60	anti-parallel
Strand 6	L	38	44	anti-parallel
Strand 7	L	31	35	anti-parallel
Strand 8	L	146	148	anti-parallel

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There are 2 strands in LA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	135	136	first strand
Strand 2	L	124	132	parallel

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There are 2 strands in KC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	135	136	first strand
Strand 2	K	124	132	parallel

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There are 6 strands in KD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	146	148	first strand
Strand 2	K	31	35	anti-parallel
Strand 3	K	38	44	anti-parallel
Strand 4	K	55	60	anti-parallel
Strand 5	K	124	132	anti-parallel
Strand 6	K	135	136	parallel

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There are 8 strands in KE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	146	148	first strand
Strand 2	K	31	35	anti-parallel
Strand 3	K	38	44	anti-parallel
Strand 4	K	55	60	anti-parallel
Strand 5	K	124	132	anti-parallel
Strand 6	K	75	82	anti-parallel
Strand 7	K	106	109	anti-parallel
Strand 8	L	23	25	anti-parallel

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There are 2 strands in KF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	69	70	first strand
Strand 2	K	175	176	anti-parallel

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There are 3 strands in KG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	96	101	first strand
Strand 2	K	85	90	anti-parallel
Strand 3	K	114	119	anti-parallel

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There are 2 strands in LB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	69	70	first strand
Strand 2	L	175	176	anti-parallel

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There are 3 strands in LC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	96	101	first strand
Strand 2	L	85	90	anti-parallel
Strand 3	L	114	119	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5FLJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
5FLJ