Analysis of interatomic Contacts of Structural Units in PDB entry:
5FLW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FLW entry

There are 2 chains in PDB entry 5FLW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3ARG 304
B
 ASP 3ARG 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 5FLW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
238 243Right-handed alpha
Helix 2
2
A
272 276Right-handed 310
Helix 3
3
B
238 243Right-handed alpha
Helix 4
4
B
272 276Right-handed 310
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There are 13 sheets in PDB entry 5FLW. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, BA, BB, BC, BD, BE,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 8first strand
Strand 2
A
278 286anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 250first strand
Strand 2
A
261 266anti-parallel
Strand 3
A
278 286anti-parallel
Strand 4
A
289 291anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 250first strand
Strand 2
A
261 266anti-parallel
Strand 3
A
278 286anti-parallel
Strand 4
A
6 8anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 291first strand
Strand 2
A
278 286anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 28first strand
Strand 2
A
31 37anti-parallel
Strand 3
A
48 53anti-parallel
Strand 4
A
60 66anti-parallel
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There are 8 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 88first strand
Strand 2
A
95 102anti-parallel
Strand 3
A
110 116anti-parallel
Strand 4
A
124 131anti-parallel
Strand 5
B
124 131anti-parallel
Strand 6
B
110 116anti-parallel
Strand 7
B
95 102anti-parallel
Strand 8
B
80 88anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 143first strand
Strand 2
A
149 155anti-parallel
Strand 3
A
159 165anti-parallel
Strand 4
A
172 179anti-parallel
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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 196first strand
Strand 2
A
199 205anti-parallel
Strand 3
A
216 220anti-parallel
Strand 4
A
231 232anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 8first strand
Strand 2
B
278 282anti-parallel
Strand 3
B
261 266anti-parallel
Strand 4
B
244 250anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 28first strand
Strand 2
B
31 37anti-parallel
Strand 3
B
48 53anti-parallel
Strand 4
B
60 66anti-parallel
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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 143first strand
Strand 2
B
149 155anti-parallel
Strand 3
B
159 165anti-parallel
Strand 4
B
172 179anti-parallel
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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
189 196first strand
Strand 2
B
199 205anti-parallel
Strand 3
B
216 220anti-parallel
Strand 4
B
231 232anti-parallel
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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
284 286first strand
Strand 2
B
289 291anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il