Analysis of interatomic Contacts of Structural Units in PDB entry:
5FN5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FN5 entry

There are 4 chains in PDB entry 5FN5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 34PHE 698
B
 GLU 68ILE 467
C
 GLY 2LEU 244
D
 ASN 2PRO 101
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 5FN5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 41Right-handed alpha
Helix 2
2
A
78 88Right-handed alpha
Helix 3
3
A
105 113Right-handed alpha
Helix 4
4
A
142 146Right-handed 310
Helix 5
5
A
185 200Right-handed alpha
Helix 6
6
A
226 240Right-handed alpha
Helix 7
7
A
298 314Right-handed alpha
Helix 8
8
A
337 350Right-handed alpha
Helix 9
9
A
381 387Right-handed alpha
Helix 10
10
A
387 407Right-handed alpha
Helix 11
11
A
425 431Right-handed alpha
Helix 12
12
A
432 434Right-handed 310
Helix 13
13
A
459 464Right-handed 310
Helix 14
14
A
474 479Right-handed alpha
Helix 15
15
A
481 504Right-handed alpha
Helix 16
16
A
514 527Right-handed alpha
Helix 17
17
A
531 537Right-handed alpha
Helix 18
18
A
541 546Right-handed 310
Helix 19
19
A
561 575Right-handed alpha
Helix 20
20
A
582 588Right-handed alpha
Helix 21
21
A
633 638Right-handed alpha
Helix 22
22
A
665 698Right-handed alpha
Helix 23
23
B
73 102Right-handed alpha
Helix 24
24
B
168 190Right-handed alpha
Helix 25
25
B
195 214Right-handed alpha
Helix 26
26
B
218 240Right-handed alpha
Helix 27
27
B
244 263Right-handed alpha
Helix 28
28
B
382 398Right-handed alpha
Helix 29
29
B
403 429Right-handed alpha
Helix 30
30
B
435 464Right-handed alpha
Helix 31
31
C
2 24Right-handed alpha
Helix 32
32
C
28 60Right-handed alpha
Helix 33
33
C
67 102Right-handed alpha
Helix 34
34
C
103 105Right-handed 310
Helix 35
35
C
114 142Right-handed alpha
Helix 36
36
C
155 185Right-handed alpha
Helix 37
37
C
186 206Right-handed alpha
Helix 38
38
C
213 233Right-handed alpha
Helix 39
39
C
235 243Right-handed alpha
Helix 40
40
D
8 20Right-handed alpha
Helix 41
41
D
26 42Right-handed alpha
Helix 42
42
D
49 54Right-handed alpha
Helix 43
43
D
55 82Right-handed alpha
Helix 44
44
D
86 92Right-handed alpha
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There are 7 sheets in PDB entry 5FN5. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, BA,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 43first strand
Strand 2
A
659 663anti-parallel
Strand 3
A
212 216anti-parallel
Strand 4
A
70 73anti-parallel
Strand 5
A
94 98parallel
Strand 6
A
121 124parallel
Strand 7
A
180 183parallel
Strand 8
A
48 49anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 60first strand
Strand 2
A
53 54anti-parallel
Strand 3
A
649 650anti-parallel
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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
413 414first strand
Strand 2
A
376 379parallel
Strand 3
A
440 442anti-parallel
Strand 4
A
361 366parallel
Strand 5
A
437 438anti-parallel
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There are 8 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
413 414first strand
Strand 2
A
376 379parallel
Strand 3
A
440 442anti-parallel
Strand 4
A
361 366parallel
Strand 5
A
275 280parallel
Strand 6
A
324 329parallel
Strand 7
A
254 259anti-parallel
Strand 8
A
626 629anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
437 438first strand
Strand 2
A
361 366anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
603 604first strand
Strand 2
A
620 621anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
193 194first strand
Strand 2
D
93 95anti-parallel
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