Analysis of interatomic Contacts of Structural Units in PDB entry:
5FNO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FNO entry

There are 2 chains in PDB entry 5FNO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 38VAL 605
B
 VAL 38VAL 605
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 5FNO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
42 46Right-handed 310
Helix 2
2
A
48 63Right-handed alpha
Helix 3
3
A
79 118Right-handed alpha
Helix 4
4
A
124 131Right-handed 310
Helix 5
5
A
153 160Right-handed alpha
Helix 6
6
A
161 163Right-handed 310
Helix 7
7
A
184 193Right-handed alpha
Helix 8
8
A
195 202Right-handed alpha
Helix 9
9
A
211 214Right-handed 310
Helix 10
10
A
260 262Right-handed 310
Helix 11
11
A
263 287Right-handed alpha
Helix 12
12
A
288 303Right-handed alpha
Helix 13
13
A
307 317Right-handed alpha
Helix 14
14
A
319 321Right-handed 310
Helix 15
15
A
322 330Right-handed alpha
Helix 16
16
A
336 342Right-handed alpha
Helix 17
17
A
345 361Right-handed alpha
Helix 18
18
A
363 366Right-handed 310
Helix 19
19
A
367 375Right-handed alpha
Helix 20
20
A
389 414Right-handed alpha
Helix 21
21
A
417 423Right-handed alpha
Helix 22
22
A
424 436Right-handed alpha
Helix 23
23
A
450 467Right-handed alpha
Helix 24
24
A
467 473Right-handed alpha
Helix 25
25
A
475 480Right-handed alpha
Helix 26
26
A
505 509Right-handed 310
Helix 27
27
A
512 525Right-handed alpha
Helix 28
28
A
528 532Right-handed 310
Helix 29
29
A
538 541Right-handed 310
Helix 30
30
A
544 551Right-handed alpha
Helix 31
31
A
552 575Right-handed alpha
Helix 32
32
B
42 46Right-handed 310
Helix 33
33
B
48 63Right-handed alpha
Helix 34
34
B
79 118Right-handed alpha
Helix 35
35
B
124 131Right-handed 310
Helix 36
36
B
153 160Right-handed alpha
Helix 37
37
B
161 163Right-handed 310
Helix 38
38
B
184 193Right-handed alpha
Helix 39
39
B
195 202Right-handed alpha
Helix 40
40
B
211 214Right-handed 310
Helix 41
41
B
260 262Right-handed 310
Helix 42
42
B
263 287Right-handed alpha
Helix 43
43
B
288 303Right-handed alpha
Helix 44
44
B
307 317Right-handed alpha
Helix 45
45
B
319 321Right-handed 310
Helix 46
46
B
322 331Right-handed alpha
Helix 47
47
B
336 342Right-handed alpha
Helix 48
48
B
345 361Right-handed alpha
Helix 49
49
B
363 366Right-handed 310
Helix 50
50
B
367 375Right-handed alpha
Helix 51
51
B
389 414Right-handed alpha
Helix 52
52
B
417 423Right-handed alpha
Helix 53
53
B
424 436Right-handed alpha
Helix 54
54
B
450 467Right-handed alpha
Helix 55
55
B
467 473Right-handed alpha
Helix 56
56
B
475 480Right-handed alpha
Helix 57
57
B
506 510Right-handed 310
Helix 58
58
B
512 525Right-handed alpha
Helix 59
59
B
528 532Right-handed 310
Helix 60
60
B
538 541Right-handed 310
Helix 61
61
B
544 551Right-handed alpha
Helix 62
62
B
552 575Right-handed alpha
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There are 4 sheets in PDB entry 5FNO. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 66first strand
Strand 2
A
76 78anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 171first strand
Strand 2
A
205 209anti-parallel
Strand 3
A
228 233anti-parallel
Strand 4
A
240 246anti-parallel
Strand 5
A
254 255anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 66first strand
Strand 2
B
76 78anti-parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
170 171first strand
Strand 2
B
205 209anti-parallel
Strand 3
B
228 233anti-parallel
Strand 4
B
240 246anti-parallel
Strand 5
B
254 255anti-parallel
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