Analysis of interatomic Contacts of Structural Units in PDB entry:
5FOA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5FOA entry

There are 2 chains in PDB entry 5FOA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 23	GLN 664
B	ASP 752	GLN 1396

There are 61 helices in PDB entry 5FOA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	77	81	Right-handed 310
Helix 2	2	A	303	311	Right-handed alpha
Helix 3	3	A	316	320	Right-handed 310
Helix 4	4	A	483	487	Right-handed 310
Helix 5	5	A	601	606	Right-handed alpha
Helix 6	6	A	612	623	Right-handed alpha
Helix 7	7	A	634	643	Right-handed alpha
Helix 8	8	B	996	1000	Right-handed 310
Helix 9	9	B	1000	1004	Right-handed 310
Helix 10	10	B	1012	1032	Right-handed alpha
Helix 11	11	B	1033	1038	Right-handed alpha
Helix 12	12	B	1040	1056	Right-handed alpha
Helix 13	13	B	1075	1089	Right-handed alpha
Helix 14	14	B	1096	1112	Right-handed alpha
Helix 15	15	B	1126	1131	Right-handed 310
Helix 16	16	B	1138	1153	Right-handed alpha
Helix 17	17	B	1164	1179	Right-handed alpha
Helix 18	18	B	1185	1198	Right-handed alpha
Helix 19	19	B	1203	1214	Right-handed alpha
Helix 20	20	B	1216	1218	Right-handed 310
Helix 21	21	B	1225	1244	Right-handed alpha
Helix 22	22	B	1249	1260	Right-handed alpha
Helix 23	23	B	1268	1286	Right-handed alpha
Helix 24	24	B	1414	1423	Right-handed alpha
Helix 25	25	B	1430	1435	Right-handed alpha
Helix 26	26	B	1528	1536	Right-handed alpha
Helix 27	27	B	1590	1595	Right-handed alpha
Helix 28	28	B	1633	1638	Right-handed alpha
Helix 29	29	B	1642	1658	Right-handed alpha
Helix 30	30	C	77	81	Right-handed 310
Helix 31	31	C	303	311	Right-handed alpha
Helix 32	32	C	316	320	Right-handed 310
Helix 33	33	C	483	487	Right-handed 310
Helix 34	34	C	522	526	Right-handed 310
Helix 35	35	C	601	606	Right-handed alpha
Helix 36	36	C	612	623	Right-handed alpha
Helix 37	37	C	634	643	Right-handed alpha
Helix 38	38	D	996	1000	Right-handed 310
Helix 39	39	D	1000	1004	Right-handed 310
Helix 40	40	D	1012	1031	Right-handed alpha
Helix 41	41	D	1033	1038	Right-handed alpha
Helix 42	42	D	1040	1056	Right-handed alpha
Helix 43	43	D	1075	1089	Right-handed alpha
Helix 44	44	D	1096	1111	Right-handed alpha
Helix 45	45	D	1138	1153	Right-handed alpha
Helix 46	46	D	1155	1159	Right-handed 310
Helix 47	47	D	1164	1179	Right-handed alpha
Helix 48	48	D	1185	1198	Right-handed alpha
Helix 49	49	D	1203	1213	Right-handed alpha
Helix 50	50	D	1226	1244	Right-handed alpha
Helix 51	51	D	1248	1259	Right-handed alpha
Helix 52	52	D	1268	1282	Right-handed alpha
Helix 53	53	D	1414	1423	Right-handed alpha
Helix 54	54	D	1430	1435	Right-handed alpha
Helix 55	55	D	1497	1501	Right-handed 310
Helix 56	56	D	1529	1536	Right-handed alpha
Helix 57	57	D	1590	1595	Right-handed alpha
Helix 58	58	D	1633	1638	Right-handed alpha
Helix 59	59	D	1642	1659	Right-handed alpha
Helix 60	60	E	112	116	Right-handed 310
Helix 61	61	F	112	116	Right-handed 310

There are 59 sheets in PDB entry 5FOA. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ, BK, BL, BM, CA, CB, CC, CD, CE, CF, CG, CH, CI, CJ, CK, A, DB, C, DD, DE, DF, G, DH, DI, DJ, DK, DL, EA, EB, EC, ED, EE, EF, FA, FB, FC, FD, FE, FF,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	89	first strand
Strand 2	A	39	47	anti-parallel
Strand 3	A	25	31	anti-parallel
Strand 4	A	644	648	anti-parallel

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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	35	first strand
Strand 2	A	115	124	parallel
Strand 3	A	104	112	anti-parallel
Strand 4	A	53	61	anti-parallel
Strand 5	A	70	76	anti-parallel

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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	134	first strand
Strand 2	A	144	153	anti-parallel
Strand 3	A	188	194	anti-parallel

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There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	138	139	first strand
Strand 2	A	213	224	parallel
Strand 3	A	202	210	anti-parallel
Strand 4	A	162	168	anti-parallel
Strand 5	A	174	181	anti-parallel

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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	232	238	first strand
Strand 2	A	251	259	anti-parallel
Strand 3	A	297	302	anti-parallel

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There are 5 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	243	244	first strand
Strand 2	A	338	349	parallel
Strand 3	A	323	332	anti-parallel
Strand 4	A	267	277	anti-parallel
Strand 5	A	280	293	anti-parallel

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There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	356	first strand
Strand 2	A	370	377	anti-parallel
Strand 3	A	406	411	anti-parallel

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There are 5 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	363	364	first strand
Strand 2	A	438	445	parallel
Strand 3	A	420	426	anti-parallel
Strand 4	A	389	391	anti-parallel
Strand 5	A	394	399	anti-parallel

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There are 3 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	455	459	first strand
Strand 2	A	470	478	anti-parallel
Strand 3	A	514	520	anti-parallel

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There are 4 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	499	507	first strand
Strand 2	A	489	496	anti-parallel
Strand 3	A	528	539	anti-parallel
Strand 4	A	543	554	anti-parallel

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There are 3 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	563	567	first strand
Strand 2	A	580	587	anti-parallel
Strand 3	B	787	794	anti-parallel

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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	775	777	first strand
Strand 2	A	592	594	anti-parallel
Strand 3	B	807	810	anti-parallel
Strand 4	B	814	817	anti-parallel

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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	770	771	first strand
Strand 2	A	597	599	anti-parallel
Strand 3	B	800	804	anti-parallel
Strand 4	B	821	825	anti-parallel

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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	763	764	first strand
Strand 2	B	922	932	parallel

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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	838	840	first strand
Strand 2	B	922	932	anti-parallel

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There are 5 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	882	888	first strand
Strand 2	B	860	866	anti-parallel
Strand 3	B	906	916	anti-parallel
Strand 4	B	922	932	anti-parallel
Strand 5	B	838	840	anti-parallel

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There are 5 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	882	888	first strand
Strand 2	B	860	866	anti-parallel
Strand 3	B	906	916	anti-parallel
Strand 4	B	922	932	anti-parallel
Strand 5	B	763	764	parallel

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There are 3 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	829	834	first strand
Strand 2	B	845	853	anti-parallel
Strand 3	B	892	900	anti-parallel

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There are 4 strands in BH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	936	945	first strand
Strand 2	B	1341	1350	anti-parallel
Strand 3	B	977	983	anti-parallel
Strand 4	B	1319	1324	anti-parallel

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There are 4 strands in BI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	959	962	first strand
Strand 2	B	1330	1337	anti-parallel
Strand 3	B	1293	1299	anti-parallel
Strand 4	B	1307	1312	anti-parallel

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There are 4 strands in BJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1361	1369	first strand
Strand 2	B	1383	1392	anti-parallel
Strand 3	B	1457	1465	anti-parallel
Strand 4	B	1411	1413	anti-parallel

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There are 5 strands in BK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1427	1428	first strand
Strand 2	B	1443	1448	anti-parallel
Strand 3	B	1401	1406	anti-parallel
Strand 4	B	1475	1481	anti-parallel
Strand 5	B	1489	1493	anti-parallel

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There are 2 strands in BL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1504	1507	first strand
Strand 2	B	1510	1513	anti-parallel

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There are 7 strands in BM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1611	1614	first strand
Strand 2	B	1617	1621	anti-parallel
Strand 3	B	1581	1587	parallel
Strand 4	B	1558	1570	anti-parallel
Strand 5	B	1543	1553	anti-parallel
Strand 6	B	1601	1606	anti-parallel
Strand 7	B	1627	1631	anti-parallel

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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	83	89	first strand
Strand 2	C	39	47	anti-parallel
Strand 3	C	25	31	anti-parallel
Strand 4	C	644	648	anti-parallel

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There are 5 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	35	first strand
Strand 2	C	115	124	parallel
Strand 3	C	104	112	anti-parallel
Strand 4	C	53	61	anti-parallel
Strand 5	C	70	76	anti-parallel

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There are 3 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	129	134	first strand
Strand 2	C	144	152	anti-parallel
Strand 3	C	188	194	anti-parallel

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There are 5 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	138	139	first strand
Strand 2	C	213	224	parallel
Strand 3	C	202	210	anti-parallel
Strand 4	C	162	168	anti-parallel
Strand 5	C	174	181	anti-parallel

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There are 3 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	232	238	first strand
Strand 2	C	251	259	anti-parallel
Strand 3	C	297	302	anti-parallel

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There are 4 strands in CF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	280	293	first strand
Strand 2	C	267	277	anti-parallel
Strand 3	C	323	332	anti-parallel
Strand 4	C	338	347	anti-parallel

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There are 3 strands in CG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	356	first strand
Strand 2	C	370	377	anti-parallel
Strand 3	C	406	411	anti-parallel

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There are 4 strands in CH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	363	364	first strand
Strand 2	C	438	445	parallel
Strand 3	C	420	426	anti-parallel
Strand 4	C	389	391	anti-parallel

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There are 3 strands in CI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	455	459	first strand
Strand 2	C	470	478	anti-parallel
Strand 3	C	514	520	anti-parallel

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There are 4 strands in CJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	499	507	first strand
Strand 2	C	489	496	anti-parallel
Strand 3	C	528	539	anti-parallel
Strand 4	C	543	554	anti-parallel

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There are 3 strands in CK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	564	567	first strand
Strand 2	C	580	587	anti-parallel
Strand 3	D	787	794	anti-parallel

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There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	775	777	first strand
Strand 2	C	592	594	anti-parallel
Strand 3	D	807	810	anti-parallel
Strand 4	D	814	817	anti-parallel

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There are 4 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	770	771	first strand
Strand 2	C	597	599	anti-parallel
Strand 3	D	800	804	anti-parallel
Strand 4	D	821	825	anti-parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	829	834	first strand
Strand 2	D	845	853	anti-parallel
Strand 3	D	892	900	anti-parallel

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There are 5 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	838	840	first strand
Strand 2	D	922	932	parallel
Strand 3	D	906	916	anti-parallel
Strand 4	D	860	866	anti-parallel
Strand 5	D	882	888	anti-parallel

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There are 4 strands in DE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	937	945	first strand
Strand 2	D	1339	1349	anti-parallel
Strand 3	D	977	985	anti-parallel
Strand 4	D	1319	1324	anti-parallel

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There are 4 strands in DF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	959	961	first strand
Strand 2	D	1331	1337	anti-parallel
Strand 3	D	1293	1299	anti-parallel
Strand 4	D	1307	1308	anti-parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	959	961	first strand
Strand 2	D	1331	1337	anti-parallel
Strand 3	D	1293	1299	anti-parallel
Strand 4	D	1311	1312	anti-parallel

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There are 2 strands in DH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1307	1308	first strand
Strand 2	D	1293	1299	anti-parallel

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There are 4 strands in DI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1361	1369	first strand
Strand 2	D	1383	1392	anti-parallel
Strand 3	D	1457	1465	anti-parallel
Strand 4	D	1411	1413	anti-parallel

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There are 5 strands in DJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1427	1428	first strand
Strand 2	D	1443	1448	anti-parallel
Strand 3	D	1401	1406	anti-parallel
Strand 4	D	1475	1481	anti-parallel
Strand 5	D	1489	1493	anti-parallel

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There are 2 strands in DK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1504	1507	first strand
Strand 2	D	1510	1513	anti-parallel

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There are 7 strands in DL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1611	1614	first strand
Strand 2	D	1617	1621	anti-parallel
Strand 3	D	1581	1587	parallel
Strand 4	D	1558	1570	anti-parallel
Strand 5	D	1543	1553	anti-parallel
Strand 6	D	1601	1606	anti-parallel
Strand 7	D	1627	1631	anti-parallel

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There are 3 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	107	109	first strand
Strand 2	E	124	129	anti-parallel
Strand 3	E	142	144	anti-parallel

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There are 2 strands in EB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	133	135	first strand
Strand 2	E	158	160	anti-parallel

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There are 4 strands in EC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	172	175	first strand
Strand 2	E	185	190	anti-parallel
Strand 3	E	201	206	anti-parallel
Strand 4	E	211	213	anti-parallel

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There are 2 strands in ED sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	194	197	first strand
Strand 2	E	219	222	anti-parallel

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There are 4 strands in EE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	234	236	first strand
Strand 2	E	248	253	anti-parallel
Strand 3	E	264	269	anti-parallel
Strand 4	E	274	276	anti-parallel

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There are 2 strands in EF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	258	260	first strand
Strand 2	E	282	284	anti-parallel

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There are 3 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	107	109	first strand
Strand 2	F	124	129	anti-parallel
Strand 3	F	142	144	anti-parallel

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There are 2 strands in FB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	133	135	first strand
Strand 2	F	158	160	anti-parallel

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There are 4 strands in FC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	172	175	first strand
Strand 2	F	185	190	anti-parallel
Strand 3	F	201	206	anti-parallel
Strand 4	F	211	213	anti-parallel

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There are 2 strands in FD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	194	197	first strand
Strand 2	F	219	222	anti-parallel

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There are 4 strands in FE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	234	236	first strand
Strand 2	F	248	253	anti-parallel
Strand 3	F	264	269	anti-parallel
Strand 4	F	274	276	anti-parallel

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There are 2 strands in FF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	258	260	first strand
Strand 2	F	282	284	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5FOA

Analysis of interatomic Contacts of Structural Units in PDB entry:
5FOA