Analysis of interatomic Contacts of Structural Units in PDB entry:
5FOE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FOE entry

There are 2 chains in PDB entry 5FOE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 40CYS 1051
B
 GLU 40CYS 1051
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 5FOE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
53 74Right-handed alpha
Helix 2
2
A
99 103Right-handed 310
Helix 3
3
A
105 113Right-handed alpha
Helix 4
4
A
118 124Right-handed alpha
Helix 5
5
A
157 162Right-handed alpha
Helix 6
6
A
173 177Right-handed 310
Helix 7
7
A
193 203Right-handed alpha
Helix 8
8
A
204 207Right-handed 310
Helix 9
9
A
216 220Right-handed 310
Helix 10
10
A
227 236Right-handed alpha
Helix 11
11
A
240 256Right-handed alpha
Helix 12
12
A
258 263Right-handed alpha
Helix 13
13
A
269 273Right-handed 310
Helix 14
14
A
291 297Right-handed 310
Helix 15
15
A
298 302Right-handed 310
Helix 16
16
A
304 320Right-handed alpha
Helix 17
17
A
331 341Right-handed alpha
Helix 18
18
A
358 372Right-handed alpha
Helix 19
19
A
382 396Right-handed alpha
Helix 20
20
A
398 402Right-handed 310
Helix 21
21
B
53 74Right-handed alpha
Helix 22
22
B
99 103Right-handed 310
Helix 23
23
B
105 111Right-handed alpha
Helix 24
24
B
118 123Right-handed alpha
Helix 25
25
B
157 162Right-handed alpha
Helix 26
26
B
173 177Right-handed 310
Helix 27
27
B
193 202Right-handed alpha
Helix 28
28
B
203 207Right-handed 310
Helix 29
29
B
216 220Right-handed 310
Helix 30
30
B
227 236Right-handed alpha
Helix 31
31
B
240 256Right-handed alpha
Helix 32
32
B
258 263Right-handed alpha
Helix 33
33
B
269 273Right-handed 310
Helix 34
34
B
292 298Right-handed alpha
Helix 35
35
B
299 302Right-handed 310
Helix 36
36
B
304 320Right-handed alpha
Helix 37
37
B
331 340Right-handed alpha
Helix 38
38
B
358 372Right-handed alpha
Helix 39
39
B
382 396Right-handed alpha
Helix 40
40
B
398 402Right-handed 310
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There are 9 sheets in PDB entry 5FOE. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, BD,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 117first strand
Strand 2
A
77 82parallel
Strand 3
A
41 46parallel
Strand 4
A
211 214parallel
Strand 5
A
130 132parallel
Strand 6
A
185 186parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 151first strand
Strand 2
A
188 191anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 166first strand
Strand 2
A
169 171anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 349first strand
Strand 2
A
323 328parallel
Strand 3
A
282 289parallel
Strand 4
A
373 377parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1020 1026first strand
Strand 2
A
1041 1047anti-parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
115 117first strand
Strand 2
B
78 82parallel
Strand 3
B
42 46parallel
Strand 4
B
211 215parallel
Strand 5
B
130 135parallel
Strand 6
B
185 191parallel
Strand 7
B
148 151anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
163 166first strand
Strand 2
B
169 171anti-parallel
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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
347 349first strand
Strand 2
B
323 328parallel
Strand 3
B
282 289parallel
Strand 4
B
373 377parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1020 1026first strand
Strand 2
B
1041 1047anti-parallel
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