Analysis of interatomic Contacts of Structural Units in PDB entry:
5FQ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FQ0 entry

There are 5 chains in PDB entry 5FQ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3LEU 112
B
 GLY 4LEU 112
C
 SER 5LYS 113
D
 SER 5LEU 112
H
 HIS 1HIS 3
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 5FQ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 12Right-handed 310
Helix 2
2
A
108 112Right-handed 310
Helix 3
3
B
8 12Right-handed 310
Helix 4
4
B
108 112Right-handed 310
Helix 5
5
C
8 12Right-handed 310
Helix 6
6
C
108 112Right-handed 310
Helix 7
7
D
8 12Right-handed 310
Helix 8
8
D
108 112Right-handed 310
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There are 8 sheets in PDB entry 5FQ0. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, CA, CB, CC, A,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 7first strand
Strand 2
B
80 83anti-parallel
Strand 3
B
54 61anti-parallel
Strand 4
B
98 105anti-parallel
Strand 5
B
32 39anti-parallel
Strand 6
B
21 29anti-parallel
Strand 7
B
15 18anti-parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 18first strand
Strand 2
A
21 29anti-parallel
Strand 3
A
32 39anti-parallel
Strand 4
A
98 105anti-parallel
Strand 5
A
54 61anti-parallel
Strand 6
A
80 83anti-parallel
Strand 7
B
5 7anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 48first strand
Strand 2
A
89 93anti-parallel
Strand 3
A
64 68anti-parallel
Strand 4
A
71 75anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 48first strand
Strand 2
B
89 93anti-parallel
Strand 3
B
64 68anti-parallel
Strand 4
B
71 75anti-parallel
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There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
6 7first strand
Strand 2
D
80 83anti-parallel
Strand 3
D
54 61anti-parallel
Strand 4
D
98 105anti-parallel
Strand 5
D
32 39anti-parallel
Strand 6
D
21 29anti-parallel
Strand 7
D
15 18anti-parallel
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There are 7 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
15 18first strand
Strand 2
C
21 29anti-parallel
Strand 3
C
32 39anti-parallel
Strand 4
C
98 105anti-parallel
Strand 5
C
54 61anti-parallel
Strand 6
C
80 83anti-parallel
Strand 7
D
6 7anti-parallel
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There are 4 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
44 48first strand
Strand 2
C
89 93anti-parallel
Strand 3
C
64 68anti-parallel
Strand 4
C
71 75anti-parallel
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There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
44 48first strand
Strand 2
D
89 93anti-parallel
Strand 3
D
64 68anti-parallel
Strand 4
D
71 75anti-parallel
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