Analysis of interatomic Contacts of Structural Units in PDB entry:
5FQ1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FQ1 entry

There are 2 chains in PDB entry 5FQ1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 199ASN 308
B
 GLY 198ASN 308
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 5FQ1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
202 217Right-handed alpha
Helix 2
2
A
234 242Right-handed alpha
Helix 3
3
A
245 249Right-handed 310
Helix 4
4
A
253 258Right-handed alpha
Helix 5
5
A
262 270Right-handed alpha
Helix 6
6
B
200 217Right-handed alpha
Helix 7
7
B
234 242Right-handed alpha
Helix 8
8
B
245 249Right-handed 310
Helix 9
9
B
253 258Right-handed alpha
Helix 10
10
B
262 270Right-handed alpha
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There are 2 sheets in PDB entry 5FQ1. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 233first strand
Strand 2
A
220 225anti-parallel
Strand 3
A
299 306anti-parallel
Strand 4
A
283 293anti-parallel
Strand 5
A
273 280anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
230 233first strand
Strand 2
B
220 225anti-parallel
Strand 3
B
299 307anti-parallel
Strand 4
B
283 293anti-parallel
Strand 5
B
273 280anti-parallel
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