Analysis of interatomic Contacts of Structural Units in PDB entry:
5FQ3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5FQ3 entry

There are 4 chains in PDB entry 5FQ3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 14	GLN 212
B	PHE 14	GLN 212
C	PHE 14	GLN 212
D	PHE 14	GLN 212

There are 5 helices in PDB entry 5FQ3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	48	51	Right-handed 310
Helix 2	2	B	48	51	Right-handed 310
Helix 3	3	C	48	51	Right-handed 310
Helix 4	4	C	139	145	Right-handed alpha
Helix 5	5	D	48	51	Right-handed 310

There are 25 sheets in PDB entry 5FQ3. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, CA, AE, AF, AG, BA, BB, BC, BD, A, BE, BF, BG, CB, CC, CD, DB, C, DD, DE, DF, G,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	15	19	first strand
Strand 2	A	38	42	anti-parallel
Strand 3	A	45	46	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	24	27	first strand
Strand 2	A	78	87	anti-parallel

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There are 6 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	54	first strand
Strand 2	A	63	72	anti-parallel
Strand 3	A	78	87	anti-parallel
Strand 4	C	77	88	anti-parallel
Strand 5	C	63	72	parallel
Strand 6	C	52	54	parallel

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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	54	first strand
Strand 2	A	63	72	anti-parallel
Strand 3	A	78	87	anti-parallel
Strand 4	A	24	27	anti-parallel

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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	24	28	first strand
Strand 2	C	77	88	parallel

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There are 5 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	54	first strand
Strand 2	A	63	72	anti-parallel
Strand 3	A	78	87	anti-parallel
Strand 4	C	77	88	anti-parallel
Strand 5	C	24	28	parallel

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There are 5 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	114	115	first strand
Strand 2	A	107	110	parallel
Strand 3	A	205	211	parallel
Strand 4	A	193	199	anti-parallel
Strand 5	A	181	188	anti-parallel

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There are 8 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	114	115	first strand
Strand 2	A	107	110	parallel
Strand 3	A	205	211	parallel
Strand 4	A	98	102	anti-parallel
Strand 5	A	120	127	anti-parallel
Strand 6	A	130	133	anti-parallel
Strand 7	A	154	159	anti-parallel
Strand 8	A	165	171	anti-parallel

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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	15	19	first strand
Strand 2	B	38	42	anti-parallel
Strand 3	B	45	46	anti-parallel

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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	24	28	first strand
Strand 2	B	77	88	parallel

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There are 6 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	54	first strand
Strand 2	B	63	72	anti-parallel
Strand 3	B	77	88	parallel
Strand 4	D	77	88	anti-parallel
Strand 5	D	63	72	anti-parallel
Strand 6	D	52	54	anti-parallel

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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	54	first strand
Strand 2	B	63	72	anti-parallel
Strand 3	B	77	88	parallel
Strand 4	B	24	28	parallel

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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	24	28	first strand
Strand 2	D	77	88	anti-parallel

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There are 5 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	54	first strand
Strand 2	B	63	72	anti-parallel
Strand 3	B	77	88	parallel
Strand 4	D	77	88	anti-parallel
Strand 5	D	24	28	anti-parallel

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There are 5 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	114	115	first strand
Strand 2	B	107	110	parallel
Strand 3	B	204	211	parallel
Strand 4	B	194	200	anti-parallel
Strand 5	B	181	187	anti-parallel

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There are 8 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	114	115	first strand
Strand 2	B	107	110	parallel
Strand 3	B	204	211	parallel
Strand 4	B	98	102	anti-parallel
Strand 5	B	120	125	anti-parallel
Strand 6	B	130	133	anti-parallel
Strand 7	B	155	159	anti-parallel
Strand 8	B	165	167	anti-parallel

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There are 3 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	15	19	first strand
Strand 2	C	38	42	anti-parallel
Strand 3	C	45	46	anti-parallel

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There are 5 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	114	115	first strand
Strand 2	C	107	110	parallel
Strand 3	C	205	211	parallel
Strand 4	C	193	199	anti-parallel
Strand 5	C	181	188	anti-parallel

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There are 8 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	114	115	first strand
Strand 2	C	107	110	parallel
Strand 3	C	205	211	parallel
Strand 4	C	99	102	anti-parallel
Strand 5	C	120	127	anti-parallel
Strand 6	C	130	133	anti-parallel
Strand 7	C	154	159	anti-parallel
Strand 8	C	165	171	anti-parallel

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There are 3 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	15	19	first strand
Strand 2	D	38	42	anti-parallel
Strand 3	D	45	46	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	101	102	first strand
Strand 2	D	205	211	anti-parallel

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There are 2 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	107	110	first strand
Strand 2	D	205	211	anti-parallel

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There are 4 strands in DE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	181	187	first strand
Strand 2	D	194	199	anti-parallel
Strand 3	D	205	211	anti-parallel
Strand 4	D	107	110	anti-parallel

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There are 4 strands in DF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	181	187	first strand
Strand 2	D	194	199	anti-parallel
Strand 3	D	205	211	anti-parallel
Strand 4	D	101	102	anti-parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	123	127	first strand
Strand 2	D	130	133	anti-parallel
Strand 3	D	154	159	anti-parallel
Strand 4	D	165	171	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5FQ3

Analysis of interatomic Contacts of Structural Units in PDB entry:
5FQ3