Analysis of interatomic Contacts of Structural Units in PDB entry:
5FQ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FQ4 entry

There are 2 chains in PDB entry 5FQ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 18LYS 480
B
 THR 18LYS 480
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 53 helices in PDB entry 5FQ4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 35Right-handed alpha
Helix 2
2
A
36 46Right-handed alpha
Helix 3
3
A
58 63Right-handed alpha
Helix 4
4
A
67 71Right-handed 310
Helix 5
5
A
73 82Right-handed alpha
Helix 6
6
A
83 95Right-handed alpha
Helix 7
7
A
97 120Right-handed alpha
Helix 8
8
A
140 158Right-handed alpha
Helix 9
9
A
174 196Right-handed alpha
Helix 10
10
A
199 214Right-handed alpha
Helix 11
11
A
234 242Right-handed alpha
Helix 12
12
A
251 261Right-handed alpha
Helix 13
13
A
263 268Right-handed 310
Helix 14
14
A
286 295Right-handed alpha
Helix 15
15
A
296 299Right-handed 310
Helix 16
16
A
300 304Right-handed 310
Helix 17
17
A
308 312Right-handed 310
Helix 18
18
A
321 336Right-handed alpha
Helix 19
19
A
339 358Right-handed alpha
Helix 20
20
A
364 369Right-handed alpha
Helix 21
21
A
373 377Right-handed 310
Helix 22
22
A
379 396Right-handed alpha
Helix 23
23
A
399 411Right-handed alpha
Helix 24
24
A
419 426Right-handed alpha
Helix 25
25
A
427 430Right-handed 310
Helix 26
26
A
455 462Right-handed alpha
Helix 27
27
B
18 35Right-handed alpha
Helix 28
28
B
36 46Right-handed alpha
Helix 29
29
B
58 63Right-handed alpha
Helix 30
30
B
67 71Right-handed 310
Helix 31
31
B
73 82Right-handed alpha
Helix 32
32
B
83 95Right-handed alpha
Helix 33
33
B
97 120Right-handed alpha
Helix 34
34
B
129 134Right-handed 310
Helix 35
35
B
140 158Right-handed alpha
Helix 36
36
B
174 196Right-handed alpha
Helix 37
37
B
199 214Right-handed alpha
Helix 38
38
B
234 241Right-handed alpha
Helix 39
39
B
251 261Right-handed alpha
Helix 40
40
B
263 268Right-handed 310
Helix 41
41
B
286 295Right-handed alpha
Helix 42
42
B
296 299Right-handed 310
Helix 43
43
B
300 304Right-handed 310
Helix 44
44
B
308 312Right-handed 310
Helix 45
45
B
321 336Right-handed alpha
Helix 46
46
B
339 358Right-handed alpha
Helix 47
47
B
364 369Right-handed alpha
Helix 48
48
B
373 377Right-handed 310
Helix 49
49
B
379 396Right-handed alpha
Helix 50
50
B
399 411Right-handed alpha
Helix 51
51
B
419 426Right-handed alpha
Helix 52
52
B
427 430Right-handed 310
Helix 53
53
B
455 462Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 5FQ4. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, BC,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 51first strand
Strand 2
A
248 250anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 223first strand
Strand 2
A
317 320anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 51first strand
Strand 2
B
248 250anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
122 123first strand
Strand 2
B
138 139anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
221 223first strand
Strand 2
B
317 320anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il