Analysis of interatomic Contacts of Structural Units in PDB entry:
5FQL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FQL entry

There are 2 chains in PDB entry 5FQL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 34VAL 83
A
 ALA 85PRO 550
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5FQL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
51 55Right-handed 310
Helix 2
2
A
61 70Right-handed alpha
Helix 3
3
A
83 94Right-handed alpha
Helix 4
4
A
96 101Right-handed alpha
Helix 5
5
A
108 113Right-handed alpha
Helix 6
6
A
118 126Right-handed alpha
Helix 7
7
A
140 144Right-handed 310
Helix 8
8
A
160 166Right-handed 310
Helix 9
9
A
187 191Right-handed 310
Helix 10
10
A
191 195Right-handed 310
Helix 11
11
A
196 213Right-handed alpha
Helix 12
12
A
237 242Right-handed 310
Helix 13
13
A
243 247Right-handed 310
Helix 14
14
A
260 264Right-handed 310
Helix 15
15
A
269 272Right-handed 310
Helix 16
16
A
273 278Right-handed alpha
Helix 17
17
A
289 321Right-handed alpha
Helix 18
18
A
341 343Right-handed 310
Helix 19
19
A
351 355Right-handed alpha
Helix 20
20
A
405 414Right-handed alpha
Helix 21
21
A
438 443Right-handed 310
Helix 22
22
A
456 461Right-handed 310
Helix 23
23
A
481 485Right-handed 310
Helix 24
24
A
541 549Right-handed alpha
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There are 7 sheets in PDB entry 5FQL. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 134first strand
Strand 2
A
219 225parallel
Strand 3
A
38 44parallel
Strand 4
A
327 333parallel
Strand 5
A
359 362anti-parallel
Strand 6
A
72 78anti-parallel
Strand 7
A
356 357anti-parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 134first strand
Strand 2
A
219 225parallel
Strand 3
A
38 44parallel
Strand 4
A
327 333parallel
Strand 5
A
359 362anti-parallel
Strand 6
A
72 78anti-parallel
Strand 7
A
395 402parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 357first strand
Strand 2
A
72 78anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 172first strand
Strand 2
A
178 179anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 186first strand
Strand 2
A
232 235parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
338 339first strand
Strand 2
A
345 346anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
462 468first strand
Strand 2
A
487 493anti-parallel
Strand 3
A
497 506anti-parallel
Strand 4
A
511 524anti-parallel
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