Analysis of interatomic Contacts of Structural Units in PDB entry:
5FS7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FS7 entry

There are 2 chains in PDB entry 5FS7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 126GLU 612
B
 LYS 127ASP 613
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 5FS7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
140 154Right-handed alpha
Helix 2
2
A
172 177Right-handed 310
Helix 3
3
A
177 181Right-handed 310
Helix 4
4
A
186 191Right-handed alpha
Helix 5
5
A
207 211Right-handed 310
Helix 6
6
A
267 273Right-handed alpha
Helix 7
7
A
274 280Right-handed alpha
Helix 8
8
A
286 298Right-handed alpha
Helix 9
9
A
309 325Right-handed alpha
Helix 10
10
A
345 359Right-handed alpha
Helix 11
11
A
406 411Right-handed alpha
Helix 12
12
A
454 469Right-handed alpha
Helix 13
13
A
584 595Right-handed alpha
Helix 14
14
A
600 606Right-handed alpha
Helix 15
15
A
607 609Right-handed 310
Helix 16
16
B
140 154Right-handed alpha
Helix 17
17
B
172 176Right-handed 310
Helix 18
18
B
177 182Right-handed alpha
Helix 19
19
B
186 191Right-handed alpha
Helix 20
20
B
207 211Right-handed 310
Helix 21
21
B
267 272Right-handed alpha
Helix 22
22
B
274 280Right-handed alpha
Helix 23
23
B
286 300Right-handed alpha
Helix 24
24
B
309 327Right-handed alpha
Helix 25
25
B
345 359Right-handed alpha
Helix 26
26
B
406 411Right-handed alpha
Helix 27
27
B
454 470Right-handed alpha
Helix 28
28
B
584 595Right-handed alpha
Helix 29
29
B
600 606Right-handed alpha
Helix 30
30
B
607 609Right-handed 310
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There are 16 sheets in PDB entry 5FS7. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, BA, BB, BC, BD, BE, BF, BG, BH,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 229first strand
Strand 2
A
158 163parallel
Strand 3
A
131 137parallel
Strand 4
A
250 258parallel
Strand 5
A
433 435parallel
Strand 6
A
428 430anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 229first strand
Strand 2
A
158 163parallel
Strand 3
A
131 137parallel
Strand 4
A
250 258parallel
Strand 5
A
242 245anti-parallel
Strand 6
A
233 237parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 194first strand
Strand 2
A
200 202anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 264first strand
Strand 2
A
400 402anti-parallel
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There are 5 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 283first strand
Strand 2
A
393 396parallel
Strand 3
A
302 306parallel
Strand 4
A
329 333parallel
Strand 5
A
362 364parallel
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There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 375first strand
Strand 2
A
378 383anti-parallel
Strand 3
A
388 391anti-parallel
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There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
421 422first strand
Strand 2
A
440 444parallel
Strand 3
A
448 451anti-parallel
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There are 5 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
481 485first strand
Strand 2
A
491 496anti-parallel
Strand 3
A
572 579anti-parallel
Strand 4
A
562 569anti-parallel
Strand 5
A
504 509anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
224 228first strand
Strand 2
B
158 162parallel
Strand 3
B
131 137parallel
Strand 4
B
250 258parallel
Strand 5
B
433 435parallel
Strand 6
B
428 430anti-parallel
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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
224 228first strand
Strand 2
B
158 162parallel
Strand 3
B
131 137parallel
Strand 4
B
250 258parallel
Strand 5
B
242 245anti-parallel
Strand 6
B
233 237parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
192 194first strand
Strand 2
B
200 202anti-parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
262 264first strand
Strand 2
B
400 402anti-parallel
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There are 5 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
281 282first strand
Strand 2
B
393 396parallel
Strand 3
B
302 306parallel
Strand 4
B
329 333parallel
Strand 5
B
361 364parallel
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There are 3 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
369 375first strand
Strand 2
B
378 383anti-parallel
Strand 3
B
388 391anti-parallel
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There are 3 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
421 422first strand
Strand 2
B
440 444parallel
Strand 3
B
448 450anti-parallel
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There are 5 strands in BH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
481 485first strand
Strand 2
B
491 496anti-parallel
Strand 3
B
572 579anti-parallel
Strand 4
B
562 569anti-parallel
Strand 5
B
504 509anti-parallel
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