Analysis of interatomic Contacts of Structural Units in PDB entry:
5FSC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FSC entry

There are 2 chains in PDB entry 5FSC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2ASP 227
B
 PRO 2ARG 226
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 5FSC

There are 12 sheets in PDB entry 5FSC. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, BA, BB, BC, BD, BE, BF,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 6first strand
Strand 2
A
219 225anti-parallel
Strand 3
A
210 216anti-parallel
Strand 4
A
202 207anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 17first strand
Strand 2
A
20 25anti-parallel
Strand 3
A
28 34anti-parallel
Strand 4
A
40 44anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 54first strand
Strand 2
A
57 63anti-parallel
Strand 3
A
66 72anti-parallel
Strand 4
A
77 81anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 92first strand
Strand 2
A
95 100anti-parallel
Strand 3
A
103 109anti-parallel
Strand 4
A
115 119anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 129first strand
Strand 2
A
132 138anti-parallel
Strand 3
A
141 147anti-parallel
Strand 4
A
155 159anti-parallel
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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 170first strand
Strand 2
A
173 178anti-parallel
Strand 3
A
181 187anti-parallel
Strand 4
A
193 197anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 6first strand
Strand 2
B
219 225anti-parallel
Strand 3
B
210 216anti-parallel
Strand 4
B
202 207anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 17first strand
Strand 2
B
20 25anti-parallel
Strand 3
B
28 34anti-parallel
Strand 4
B
40 44anti-parallel
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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 54first strand
Strand 2
B
57 63anti-parallel
Strand 3
B
66 72anti-parallel
Strand 4
B
77 81anti-parallel
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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 92first strand
Strand 2
B
95 100anti-parallel
Strand 3
B
103 109anti-parallel
Strand 4
B
115 119anti-parallel
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There are 4 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 129first strand
Strand 2
B
132 138anti-parallel
Strand 3
B
141 147anti-parallel
Strand 4
B
155 159anti-parallel
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There are 4 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 170first strand
Strand 2
B
173 178anti-parallel
Strand 3
B
181 187anti-parallel
Strand 4
B
193 197anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il