Analysis of interatomic Contacts of Structural Units in PDB entry:
5FSG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FSG entry

There is 1 chain in PDB entry 5FSG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE -372PRO 426
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 5FSG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-356 -340Right-handed alpha
Helix 2
2
A
-330 -320Right-handed alpha
Helix 3
3
A
-306 -299Right-handed alpha
Helix 4
4
A
-290 -285Right-handed alpha
Helix 5
5
A
-282 -275Right-handed alpha
Helix 6
6
A
-241 -231Right-handed alpha
Helix 7
7
A
-219 -208Right-handed alpha
Helix 8
8
A
-187 -171Right-handed alpha
Helix 9
9
A
-163 -153Right-handed alpha
Helix 10
10
A
-144 -142Right-handed 310
Helix 11
11
A
-141 -134Right-handed alpha
Helix 12
12
A
-100 -89Right-handed alpha
Helix 13
13
A
-86 -75Right-handed alpha
Helix 14
14
A
-68 -60Right-handed alpha
Helix 15
15
A
-58 -45Right-handed alpha
Helix 16
16
A
-37 -20Right-handed alpha
Helix 17
17
A
-16 113Right-handed alpha
Helix 18
18
A
118 129Right-handed alpha
Helix 19
19
A
130 142Right-handed alpha
Helix 20
20
A
194 206Right-handed alpha
Helix 21
21
A
207 214Right-handed alpha
Helix 22
22
A
220 224Right-handed 310
Helix 23
23
A
225 231Right-handed alpha
Helix 24
24
A
231 242Right-handed alpha
Helix 25
25
A
261 277Right-handed alpha
Helix 26
26
A
278 291Right-handed alpha
Helix 27
27
A
324 347Right-handed alpha
Helix 28
28
A
360 371Right-handed alpha
Helix 29
29
A
377 395Right-handed alpha
Helix 30
30
A
403 421Right-handed alpha
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There are 7 sheets in PDB entry 5FSG. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
-337 -334first strand
Strand 2
A
-365 -362parallel
Strand 3
A
-313 -309parallel
Strand 4
A
-114 -106anti-parallel
Strand 5
A
-44 -43parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
-337 -334first strand
Strand 2
A
-365 -362parallel
Strand 3
A
-313 -309parallel
Strand 4
A
-114 -106anti-parallel
Strand 5
A
-266 -261anti-parallel
Strand 6
A
-71 -70anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
-44 -43first strand
Strand 2
A
-114 -106parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
-274 -273first strand
Strand 2
A
-270 -269anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
-227 -225first strand
Strand 2
A
-150 -145parallel
Strand 3
A
-258 -254anti-parallel
Strand 4
A
-130 -127anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
-203 -200first strand
Strand 2
A
-197 -191anti-parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 159first strand
Strand 2
A
177 180anti-parallel
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