Analysis of interatomic Contacts of Structural Units in PDB entry:
5FSR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FSR entry

There are 2 chains in PDB entry 5FSR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -14THR 346
B
 HIS -14THR 346
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5FSR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
40 42Right-handed 310
Helix 2
2
A
43 58Right-handed alpha
Helix 3
3
A
70 74Right-handed 310
Helix 4
4
A
97 106Right-handed alpha
Helix 5
5
A
109 122Right-handed alpha
Helix 6
6
A
123 138Right-handed alpha
Helix 7
7
A
159 172Right-handed alpha
Helix 8
8
A
174 180Right-handed alpha
Helix 9
9
A
181 183Right-handed 310
Helix 10
10
A
197 202Right-handed 310
Helix 11
11
A
242 260Right-handed alpha
Helix 12
12
A
301 304Right-handed 310
Helix 13
13
B
40 42Right-handed 310
Helix 14
14
B
43 58Right-handed alpha
Helix 15
15
B
70 74Right-handed 310
Helix 16
16
B
97 106Right-handed alpha
Helix 17
17
B
109 122Right-handed alpha
Helix 18
18
B
123 138Right-handed alpha
Helix 19
19
B
159 172Right-handed alpha
Helix 20
20
B
174 179Right-handed alpha
Helix 21
21
B
180 183Right-handed 310
Helix 22
22
B
197 202Right-handed 310
Helix 23
23
B
242 260Right-handed alpha
Helix 24
24
B
301 304Right-handed 310
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There are 14 sheets in PDB entry 5FSR. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, BA, BB, BC, BD, BE, BF, BG,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 32first strand
Strand 2
A
17 22anti-parallel
Strand 3
A
231 240anti-parallel
Strand 4
A
220 228anti-parallel
Strand 5
A
211 214parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 32first strand
Strand 2
A
17 22anti-parallel
Strand 3
A
231 240anti-parallel
Strand 4
A
220 228anti-parallel
Strand 5
A
206 207anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 214first strand
Strand 2
A
220 228parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 68first strand
Strand 2
A
94 96anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 188first strand
Strand 2
A
191 194anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 267first strand
Strand 2
A
294 299anti-parallel
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There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 309first strand
Strand 2
A
328 334anti-parallel
Strand 3
A
337 344anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 32first strand
Strand 2
B
17 22anti-parallel
Strand 3
B
232 240anti-parallel
Strand 4
B
220 227anti-parallel
Strand 5
B
211 214parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 32first strand
Strand 2
B
17 22anti-parallel
Strand 3
B
232 240anti-parallel
Strand 4
B
220 227anti-parallel
Strand 5
B
206 207anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
211 214first strand
Strand 2
B
220 227parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 68first strand
Strand 2
B
94 96anti-parallel
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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 188first strand
Strand 2
B
191 194anti-parallel
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There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
261 267first strand
Strand 2
B
294 299anti-parallel
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There are 3 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
306 311first strand
Strand 2
B
326 334anti-parallel
Strand 3
B
337 345anti-parallel
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