Analysis of interatomic Contacts of Structural Units in PDB entry:
5FT0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FT0 entry

There are 2 chains in PDB entry 5FT0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2VAL 256
B
 THR 2VAL 257
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 5FT0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 16Right-handed alpha
Helix 2
2
A
66 83Right-handed alpha
Helix 3
3
A
86 99Right-handed alpha
Helix 4
4
A
135 138Right-handed 310
Helix 5
5
A
139 147Right-handed alpha
Helix 6
6
A
157 188Right-handed alpha
Helix 7
7
A
238 243Right-handed alpha
Helix 8
8
A
244 247Right-handed 310
Helix 9
9
A
248 253Right-handed alpha
Helix 10
10
B
7 16Right-handed alpha
Helix 11
11
B
66 83Right-handed alpha
Helix 12
12
B
86 99Right-handed alpha
Helix 13
13
B
135 138Right-handed 310
Helix 14
14
B
139 147Right-handed alpha
Helix 15
15
B
157 188Right-handed alpha
Helix 16
16
B
239 246Right-handed alpha
Helix 17
17
B
247 253Right-handed 310
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There are 7 sheets in PDB entry 5FT0. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 6first strand
Strand 2
A
30 37anti-parallel
Strand 3
A
42 48anti-parallel
Strand 4
A
55 59anti-parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 106first strand
Strand 2
A
109 115anti-parallel
Strand 3
A
122 132anti-parallel
Strand 4
A
220 232anti-parallel
Strand 5
A
206 217anti-parallel
Strand 6
A
197 202anti-parallel
Strand 7
A
149 151anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 106first strand
Strand 2
A
109 115anti-parallel
Strand 3
A
122 132anti-parallel
Strand 4
B
254 256parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 256first strand
Strand 2
B
122 132anti-parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 105first strand
Strand 2
B
109 116parallel
Strand 3
B
122 132anti-parallel
Strand 4
B
220 232anti-parallel
Strand 5
B
206 217anti-parallel
Strand 6
B
197 202anti-parallel
Strand 7
B
149 151anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 105first strand
Strand 2
B
109 116parallel
Strand 3
B
122 132anti-parallel
Strand 4
A
254 256anti-parallel
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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 6first strand
Strand 2
B
30 37anti-parallel
Strand 3
B
42 48anti-parallel
Strand 4
B
55 59anti-parallel
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