Analysis of interatomic Contacts of Structural Units in PDB entry:
5FT5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FT5 entry

There are 4 chains in PDB entry 5FT5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 357
A
 ALA 359ASP 401
B
 MET 1HIS 357
B
 ALA 359ASP 401
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 5FT5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 11Right-handed alpha
Helix 2
2
A
15 20Right-handed alpha
Helix 3
3
A
32 45Right-handed alpha
Helix 4
4
A
54 67Right-handed alpha
Helix 5
5
A
67 77Right-handed alpha
Helix 6
6
A
80 82Right-handed 310
Helix 7
7
A
89 101Right-handed alpha
Helix 8
8
A
119 122Right-handed 310
Helix 9
9
A
123 134Right-handed alpha
Helix 10
10
A
149 151Right-handed 310
Helix 11
11
A
152 157Right-handed alpha
Helix 12
12
A
178 189Right-handed alpha
Helix 13
13
A
199 204Right-handed alpha
Helix 14
14
A
235 242Right-handed alpha
Helix 15
15
A
266 270Right-handed 310
Helix 16
16
A
275 290Right-handed alpha
Helix 17
17
A
293 313Right-handed alpha
Helix 18
18
A
337 348Right-handed alpha
Helix 19
19
A
359 367Right-handed alpha
Helix 20
20
A
381 400Right-handed alpha
Helix 21
21
B
5 11Right-handed alpha
Helix 22
22
B
12 14Right-handed 310
Helix 23
23
B
15 20Right-handed alpha
Helix 24
24
B
32 44Right-handed alpha
Helix 25
25
B
54 77Right-handed alpha
Helix 26
26
B
80 82Right-handed 310
Helix 27
27
B
89 101Right-handed alpha
Helix 28
28
B
119 122Right-handed 310
Helix 29
29
B
123 134Right-handed alpha
Helix 30
30
B
149 151Right-handed 310
Helix 31
31
B
152 157Right-handed alpha
Helix 32
32
B
178 189Right-handed alpha
Helix 33
33
B
199 204Right-handed alpha
Helix 34
34
B
221 223Right-handed 310
Helix 35
35
B
235 242Right-handed alpha
Helix 36
36
B
266 270Right-handed 310
Helix 37
37
B
275 290Right-handed alpha
Helix 38
38
B
293 313Right-handed alpha
Helix 39
39
B
337 348Right-handed alpha
Helix 40
40
B
359 367Right-handed alpha
Helix 41
41
B
381 400Right-handed alpha
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There are 8 sheets in PDB entry 5FT5. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 22first strand
Strand 2
A
350 351parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 87first strand
Strand 2
A
230 234anti-parallel
Strand 3
A
215 219anti-parallel
Strand 4
A
192 196parallel
Strand 5
A
161 167parallel
Strand 6
A
111 115parallel
Strand 7
A
136 140parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
252 256first strand
Strand 2
A
259 262anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
318 320first strand
Strand 2
A
328 333anti-parallel
Strand 3
A
372 375anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 22first strand
Strand 2
B
350 351parallel
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There are 7 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 87first strand
Strand 2
B
230 234anti-parallel
Strand 3
B
215 219anti-parallel
Strand 4
B
192 196parallel
Strand 5
B
161 167parallel
Strand 6
B
111 115parallel
Strand 7
B
136 140parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
252 256first strand
Strand 2
B
259 262anti-parallel
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There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
318 320first strand
Strand 2
B
328 333anti-parallel
Strand 3
B
372 375anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il