Analysis of interatomic Contacts of Structural Units in PDB entry:
5FT6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FT6 entry

There are 4 chains in PDB entry 5FT6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 357
A
 ALA 359ASP 401
B
 ASN 2HIS 357
B
 ALA 359ASP 401
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 5FT6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 11Right-handed alpha
Helix 2
2
A
15 20Right-handed alpha
Helix 3
3
A
32 45Right-handed alpha
Helix 4
4
A
54 77Right-handed alpha
Helix 5
5
A
80 82Right-handed 310
Helix 6
6
A
89 101Right-handed alpha
Helix 7
7
A
119 122Right-handed 310
Helix 8
8
A
123 134Right-handed alpha
Helix 9
9
A
152 157Right-handed alpha
Helix 10
10
A
178 189Right-handed alpha
Helix 11
11
A
199 204Right-handed alpha
Helix 12
12
A
235 242Right-handed alpha
Helix 13
13
A
266 270Right-handed 310
Helix 14
14
A
275 290Right-handed alpha
Helix 15
15
A
293 313Right-handed alpha
Helix 16
16
A
337 348Right-handed alpha
Helix 17
17
A
359 366Right-handed alpha
Helix 18
18
A
381 399Right-handed alpha
Helix 19
19
B
5 11Right-handed alpha
Helix 20
20
B
15 20Right-handed alpha
Helix 21
21
B
32 45Right-handed alpha
Helix 22
22
B
54 67Right-handed alpha
Helix 23
23
B
67 77Right-handed alpha
Helix 24
24
B
80 82Right-handed 310
Helix 25
25
B
89 101Right-handed alpha
Helix 26
26
B
119 122Right-handed 310
Helix 27
27
B
123 134Right-handed alpha
Helix 28
28
B
149 151Right-handed 310
Helix 29
29
B
152 157Right-handed alpha
Helix 30
30
B
178 189Right-handed alpha
Helix 31
31
B
199 204Right-handed alpha
Helix 32
32
B
235 242Right-handed alpha
Helix 33
33
B
266 270Right-handed 310
Helix 34
34
B
275 290Right-handed alpha
Helix 35
35
B
293 314Right-handed alpha
Helix 36
36
B
337 348Right-handed alpha
Helix 37
37
B
359 367Right-handed alpha
Helix 38
38
B
381 400Right-handed alpha
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There are 8 sheets in PDB entry 5FT6. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 22first strand
Strand 2
A
350 351parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 87first strand
Strand 2
A
230 234anti-parallel
Strand 3
A
215 219anti-parallel
Strand 4
A
192 196parallel
Strand 5
A
161 167parallel
Strand 6
A
111 115parallel
Strand 7
A
136 140parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
252 255first strand
Strand 2
A
260 262anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
318 320first strand
Strand 2
A
328 333anti-parallel
Strand 3
A
372 375anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 22first strand
Strand 2
B
350 351parallel
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There are 7 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 87first strand
Strand 2
B
230 234anti-parallel
Strand 3
B
215 219anti-parallel
Strand 4
B
192 196parallel
Strand 5
B
161 167parallel
Strand 6
B
111 115parallel
Strand 7
B
136 140parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
252 256first strand
Strand 2
B
259 262anti-parallel
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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
318 320first strand
Strand 2
B
328 333anti-parallel
Strand 3
B
371 375anti-parallel
Strand 4
B
353 355anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il