Analysis of interatomic Contacts of Structural Units in PDB entry:
5FT9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FT9 entry

There are 2 chains in PDB entry 5FT9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 28GLN 515
B
 ASN 28GLN 515
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 5FT9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 44Right-handed alpha
Helix 2
2
A
45 60Right-handed alpha
Helix 3
3
A
66 82Right-handed alpha
Helix 4
4
A
85 102Right-handed alpha
Helix 5
5
A
108 122Right-handed alpha
Helix 6
6
A
124 139Right-handed alpha
Helix 7
7
A
145 159Right-handed alpha
Helix 8
8
A
161 176Right-handed alpha
Helix 9
9
A
180 194Right-handed alpha
Helix 10
10
A
196 211Right-handed alpha
Helix 11
11
A
215 227Right-handed alpha
Helix 12
12
A
228 235Right-handed alpha
Helix 13
13
A
242 253Right-handed alpha
Helix 14
14
A
294 311Right-handed alpha
Helix 15
15
A
322 336Right-handed alpha
Helix 16
16
A
344 350Right-handed alpha
Helix 17
17
A
360 376Right-handed alpha
Helix 18
18
A
387 396Right-handed alpha
Helix 19
19
A
396 410Right-handed alpha
Helix 20
20
A
422 432Right-handed alpha
Helix 21
21
A
444 451Right-handed alpha
Helix 22
22
A
452 462Right-handed alpha
Helix 23
23
B
28 44Right-handed alpha
Helix 24
24
B
45 60Right-handed alpha
Helix 25
25
B
65 82Right-handed alpha
Helix 26
26
B
85 103Right-handed alpha
Helix 27
27
B
108 122Right-handed alpha
Helix 28
28
B
124 139Right-handed alpha
Helix 29
29
B
145 159Right-handed alpha
Helix 30
30
B
161 175Right-handed alpha
Helix 31
31
B
180 194Right-handed alpha
Helix 32
32
B
196 211Right-handed alpha
Helix 33
33
B
215 227Right-handed alpha
Helix 34
34
B
228 235Right-handed alpha
Helix 35
35
B
242 253Right-handed alpha
Helix 36
36
B
294 311Right-handed alpha
Helix 37
37
B
322 335Right-handed alpha
Helix 38
38
B
344 350Right-handed alpha
Helix 39
39
B
360 376Right-handed alpha
Helix 40
40
B
387 396Right-handed alpha
Helix 41
41
B
396 410Right-handed alpha
Helix 42
42
B
423 433Right-handed alpha
Helix 43
43
B
444 451Right-handed alpha
Helix 44
44
B
452 462Right-handed alpha
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There are 5 sheets in PDB entry 5FT9. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, BC,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 273first strand
Strand 2
A
509 513anti-parallel
Strand 3
A
493 496anti-parallel
Strand 4
A
486 487anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
412 415first strand
Strand 2
A
382 386parallel
Strand 3
A
340 343parallel
Strand 4
A
435 437parallel
Strand 5
A
463 467parallel
Strand 6
A
474 476anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
268 273first strand
Strand 2
B
509 514anti-parallel
Strand 3
B
493 496anti-parallel
Strand 4
B
486 487anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
280 281first strand
Strand 2
B
286 287anti-parallel
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There are 6 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
412 415first strand
Strand 2
B
382 386parallel
Strand 3
B
340 343parallel
Strand 4
B
435 437parallel
Strand 5
B
463 469parallel
Strand 6
B
472 476anti-parallel
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