Analysis of interatomic Contacts of Structural Units in PDB entry:
5FTW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FTW entry

There is 1 chain in PDB entry 5FTW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2ARG 256
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 5FTW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 16Right-handed alpha
Helix 2
2
A
18 21Right-handed 310
Helix 3
3
A
23 38Right-handed alpha
Helix 4
4
A
42 53Right-handed alpha
Helix 5
5
A
53 63Right-handed alpha
Helix 6
6
A
74 85Right-handed alpha
Helix 7
7
A
85 90Right-handed alpha
Helix 8
8
A
105 117Right-handed alpha
Helix 9
9
A
132 142Right-handed alpha
Helix 10
10
A
147 149Right-handed 310
Helix 11
11
A
153 160Right-handed alpha
Helix 12
12
A
172 177Right-handed alpha
Helix 13
13
A
203 206Right-handed 310
Helix 14
14
A
208 222Right-handed alpha
Helix 15
15
A
239 243Right-handed 310
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There are 2 sheets in PDB entry 5FTW. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 183first strand
Strand 2
A
124 130parallel
Strand 3
A
95 100parallel
Strand 4
A
195 200parallel
Strand 5
A
223 231parallel
Strand 6
A
252 255anti-parallel
Strand 7
A
245 249anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 145first strand
Strand 2
A
168 171anti-parallel
Strand 3
A
161 165anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il