Analysis of interatomic Contacts of Structural Units in PDB entry:
5FTX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5FTX entry

There is 1 chain in PDB entry 5FTX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 447SER 1097
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 9 helices in PDB entry 5FTX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
607 610Right-handed 310
Helix 2
2
A
775 779Right-handed 310
Helix 3
3
A
782 788Right-handed alpha
Helix 4
4
A
810 819Right-handed alpha
Helix 5
5
A
836 840Right-handed 310
Helix 6
6
A
883 886Right-handed 310
Helix 7
7
A
979 983Right-handed 310
Helix 8
8
A
1043 1048Right-handed alpha
Helix 9
9
A
1089 1093Right-handed 310
Back to top of page

There are 18 sheets in PDB entry 5FTX. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
448 456first strand
Strand 2
A
483 490anti-parallel
Strand 3
A
496 497anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
470 471first strand
Strand 2
A
477 478anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
507 510first strand
Strand 2
A
530 537anti-parallel
Strand 3
A
543 549anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
516 518first strand
Strand 2
A
524 526anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
555 560first strand
Strand 2
A
572 581anti-parallel
Strand 3
A
614 620anti-parallel
Strand 4
A
604 605anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
592 595first strand
Strand 2
A
625 633anti-parallel
Strand 3
A
636 644anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
653 657first strand
Strand 2
A
676 683anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
689 692first strand
Strand 2
A
676 683parallel
Back to list of sheets
Back to top of page

There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
711 718first strand
Strand 2
A
721 728anti-parallel
Strand 3
A
676 683anti-parallel
Strand 4
A
689 692parallel
Back to list of sheets
Back to top of page

There are 4 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
711 718first strand
Strand 2
A
721 728anti-parallel
Strand 3
A
676 683anti-parallel
Strand 4
A
653 657anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
662 664first strand
Strand 2
A
750 756parallel
Strand 3
A
735 742anti-parallel
Strand 4
A
698 700anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
764 767first strand
Strand 2
A
790 793anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
771 773first strand
Strand 2
A
873 878parallel
Strand 3
A
855 863anti-parallel
Strand 4
A
820 825anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AN sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
841 842first strand
Strand 2
A
846 847anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AO sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
892 895first strand
Strand 2
A
902 906anti-parallel
Strand 3
A
950 952anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AP sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
942 944first strand
Strand 2
A
916 922anti-parallel
Strand 3
A
958 964anti-parallel
Strand 4
A
970 977anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AQ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
995 999first strand
Strand 2
A
1008 1014anti-parallel
Strand 3
A
1059 1062anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AR sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1052 1053first strand
Strand 2
A
1021 1028anti-parallel
Strand 3
A
1068 1074anti-parallel
Strand 4
A
1080 1087anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il